RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 TIMM29Q9BSF4 260 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF442Q9H7R0 627 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 RRAGDQ9NQL2 400 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-209ENST00000472044 ENOPH1Q9UHY7 261 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 PHLPP2Q6ZVD8 1323 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 SMIM26A0A096LP01 95 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 A0A1B0GTQ1 180 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 GABRR3A8MPY1 467 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 SERPINE3A8MV23 424 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 SUPT3HB4E1H0 165 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 ANKRD65E5RJM6 399 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 EIF1BO60739 113 aaKnown RBP2.1□□□□□ -2.07
PTCD3-209ENST00000472044 PAHP00439 452 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 STAG3L3P0CL85 134 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 CD37P11049 281 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 CD70P32970 193 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 TALDO1P37837 337 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 EIF1P41567 113 aaKnown RBP2.1□□□□□ -2.07
PTCD3-209ENST00000472044 PPICP45877 212 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 SERPINB8P50452 374 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 CLDN8P56748 225 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 KDSRQ06136 332 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 SIGLEC14Q08ET2 396 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 DNAJC3Q13217 504 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF829Q3KNS6 432 aaPredicted RBP2.1□□□□□ -2.07
PTCD3-209ENST00000472044 PLCXD3Q63HM9 321 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 ANGPTL8Q6UXH0 198 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 UNQ9165/PRO28630Q6UXU0 137 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 TMCO2Q7Z6W1 182 aaPredicted RBP2.1□□□□□ -2.07
PTCD3-209ENST00000472044 LRRC75AQ8NAA5 344 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 UBAC2Q8NBM4 344 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 GPR26Q8NDV2 337 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 C19orf18Q8NEA5 215 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 TTLQ8NG68 377 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 OR52P1PQ8NH57 321 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 GPX8Q8TED1 209 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 RAB1CQ92928 201 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 PEX13Q92968 403 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 AGMATQ9BSE5 352 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF2Q9BSG1 426 aaPredicted RBP2.1□□□□□ -2.07
PTCD3-209ENST00000472044 TMEM243Q9BU79 118 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 DEFB129Q9H1M3 183 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 RGS18Q9NS28 235 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 AHSPQ9NZD4 102 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 PEF1Q9UBV8 284 aaKnown RBP2.1□□□□□ -2.07
PTCD3-209ENST00000472044 MARCOQ9UEW3 520 aaPredicted RBP2.1□□□□□ -2.07
PTCD3-209ENST00000472044 PSME2Q9UL46 239 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 TICRRQ7Z2Z1 1910 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 TTC41PQ6P2S7 1318 aa2.1□□□□□ -2.07
PTCD3-209ENST00000472044 IGKV6-21A0A0C4DH24 114 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 A0A1B0GUH1 482 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 NCF1BA6NI72 391 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-209ENST00000472044 OR5H1A6NKK0 313 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 NCF1CA8MVU1 366 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-209ENST00000472044 CHMP2AO43633 222 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 SLC16A7O60669 478 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 TDP2O95551 362 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 IGLV3-25P01717 112 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 HLA-DQB1P01920 261 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 IL4P05112 153 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 KRT16P08779 473 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF806P0C7X5 589 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 GFAPP14136 432 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 GABRG2P18507 467 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 CELP19835 753 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 CD82P27701 267 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 GPR1P46091 355 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 TAS2R39P59534 338 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 TAS2R46P59540 309 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 KRTAP10-10P60014 251 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF616Q08AN1 781 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 TFDP2Q14188 446 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 RBMY1FQ15415 496 aaKnown RBP2.09□□□□□ -2.07
PTCD3-209ENST00000472044 TEX30Q5JUR7 227 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 RTL4Q6ZR62 310 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 UNC93AQ86WB7 457 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 LYPD1Q8N2G4 141 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 SPANXA2-OT1Q8N9U9 137 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 INO80EQ8NBZ0 244 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-209ENST00000472044 OR4M1Q8NGD0 313 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 RTN4IP1Q8WWV3 396 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-209ENST00000472044 CSPG4P5Q96PW8 444 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 TEAD3Q99594 435 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 UQCC2Q9BRT2 126 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 PXMP2Q9NR77 195 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 MCUBQ9NWR8 336 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 RHBDL2Q9NX52 303 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 SIGLEC9Q9Y336 463 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 CBY1Q9Y3M2 126 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 WIF1Q9Y5W5 379 aa2.09□□□□□ -2.07
PTCD3-209ENST00000472044 ADGRA3Q8IWK6 1321 aa2.09□□□□□ -2.08
PTCD3-209ENST00000472044 COL1A2P08123 1366 aa2.09□□□□□ -2.08
PTCD3-209ENST00000472044 IGKV1-27A0A075B6S5 117 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 GOLGA6L7A0A1B0GV03 622 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 A8MUU9 505 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 ZNF99A8MXY4 864 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-209ENST00000472044 AKR7A2O43488 359 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 DCNP07585 359 aaKnown RBP2.08□□□□□ -2.08
PTCD3-209ENST00000472044 RALBP11234 206 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 BMI1P35226 326 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms