RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 A0A1B0GVI7 797 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 XRCC2O43543 280 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 SYT7O43581 403 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 ACHEP22303 614 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 GABRA5P31644 462 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 THBS4P35443 961 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 CRYBB2P43320 205 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 SOX2P48431 317 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 FAM3AP98173 230 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 MALLQ13021 153 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 TNK1Q13470 666 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 TMEM255AQ5JRV8 349 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 OR5L1Q8NGL2 311 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 ORAI1Q96D31 301 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 CMBLQ96DG6 245 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 MARS2Q96GW9 593 aaKnown RBP16.5■□□□□ 0.23
PSPC1-203ENST00000471658 REPIN1Q9BWE0 567 aaKnown RBP16.5■□□□□ 0.23
PSPC1-203ENST00000471658 BCL2L14Q9BZR8 327 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 HHLA2Q9UM44 414 aa16.5■□□□□ 0.23
PSPC1-203ENST00000471658 A0A1W2PPK0 400 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 H3BSA7 217 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 GPX5O75715 221 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 CD53P19397 219 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 CCL1P22362 96 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 ACKR3P25106 362 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 FABP6P51161 128 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 ALKBH6Q3KRA9 238 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 ACSM3Q53FZ2 586 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 PLPP7Q8NBV4 271 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 OR14K1Q8NGZ2 314 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 KLF14Q8TD94 323 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-203ENST00000471658 OR14A2Q96R54 314 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 SPEF1Q9Y4P9 236 aa16.49■□□□□ 0.23
PSPC1-203ENST00000471658 UTP20O75691 2785 aaKnown RBP16.49■□□□□ 0.23
PSPC1-203ENST00000471658 TRBV5-5A0A0J9YX44 114 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 hCG_38984A0A1B0GV85 526 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 ANKRD61A6NGH8 418 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 J3QW42 95 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 GSK3AP49840 483 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 YIF1BQ5BJH7 314 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 FAM27D1Q5T7N8 215 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 SP5Q6BEB4 398 aaPredicted RBP16.48■□□□□ 0.23
PSPC1-203ENST00000471658 OR2T2Q6IF00 324 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 PGAP1Q75T13 922 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 DOK3Q7L591 496 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 MRPL21Q7Z2W9 205 aaKnown RBP16.48■□□□□ 0.23
PSPC1-203ENST00000471658 LRP11Q86VZ4 500 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 MS4A15Q8N5U1 240 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 LILRB1Q8NHL6 650 aaPredicted RBP16.48■□□□□ 0.23
PSPC1-203ENST00000471658 GPR148Q8TDV2 347 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 AKAP1Q92667 903 aaKnown RBP eCLIP16.48■□□□□ 0.23
PSPC1-203ENST00000471658 CHCHD6Q9BRQ6 235 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 PPIL3Q9H2H8 161 aaKnown RBP16.48■□□□□ 0.23
PSPC1-203ENST00000471658 RNF167Q9H6Y7 350 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 POU2F3Q9UKI9 436 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 RNF115Q9Y4L5 304 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 LRRK2Q5S007 2527 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 DPPA5A6NC42 116 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 GABRPO00591 440 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 GLRXP35754 106 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 LSM3P62310 102 aaKnown RBP16.48■□□□□ 0.23
PSPC1-203ENST00000471658 PSG7Q13046 419 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 FBXW12Q6X9E4 464 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 CEACAM19Q7Z692 300 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 CLVS1Q8IUQ0 354 aaPredicted RBP16.48■□□□□ 0.23
PSPC1-203ENST00000471658 NUP37Q8NFH4 326 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 OR13C3Q8NGS6 347 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 TMEM171Q8WVE6 324 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 TSEN15Q8WW01 171 aaKnown RBP16.48■□□□□ 0.23
PSPC1-203ENST00000471658 FGGYQ96C11 551 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 SPOCK3Q9BQ16 436 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 TMEM204Q9BSN7 226 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 RGCCQ9H4X1 137 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 V9GYS6 101 aa16.48■□□□□ 0.23
PSPC1-203ENST00000471658 SPTAN1Q13813 2472 aaKnown RBP16.47■□□□□ 0.23
PSPC1-203ENST00000471658 E7EQL1 145 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 PIN1P1O15428 100 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 LILRA1O75019 489 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 SC5DO75845 299 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 DHRS3O75911 302 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 RGS9O75916 674 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-203ENST00000471658 OCM2P0CE71 109 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 PSMA1P25786 263 aaKnown RBP16.47■□□□□ 0.23
PSPC1-203ENST00000471658 COL8A1P27658 744 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 DAZAP2Q15038 168 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-203ENST00000471658 ZNF718Q3SXZ3 478 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 RGS7BPQ6MZT1 257 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-203ENST00000471658 CD200R1LQ6Q8B3 271 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 UNQ9370/PRO34162Q6UXP9 181 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 UNQ6126/PRO20091Q6UXV3 157 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 Q6ZSR3 168 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 ADAT3Q96EY9 351 aaPredicted RBP16.47■□□□□ 0.23
PSPC1-203ENST00000471658 PPP1R3EQ9H7J1 279 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 EXOSC4Q9NPD3 245 aaKnown RBP16.47■□□□□ 0.23
PSPC1-203ENST00000471658 CA10Q9NS85 328 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 STUB1Q9UNE7 303 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 DHDHQ9UQ10 334 aa16.47■□□□□ 0.23
PSPC1-203ENST00000471658 LOC100506127A0A0U1RQW1 187 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 A0A1W2PPR1 153 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 GGT3PA6NGU5 568 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms