RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 LMO4P61968 165 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF85Q03923 595 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 EGR3Q06889 387 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 SCRN3Q0VDG4 424 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 EIF2B1Q14232 305 aaKnown RBP7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ENDOGQ14249 297 aaKnown RBP7.73□□□□□ -1.17
SF3A1-206ENST00000471037 KCTD18Q6PI47 426 aaPredicted RBP7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF322Q6U7Q0 402 aaPredicted RBP7.73□□□□□ -1.17
SF3A1-206ENST00000471037 TMPRSS11AQ6ZMR5 421 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 PLEKHG7Q6ZR37 379 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 RHOUQ7L0Q8 258 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 SLC16A14Q7RTX9 510 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 DCXRQ7Z4W1 244 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 LHFPL3Q86UP9 236 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 SYS1Q8N2H4 156 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 KLHL36Q8N4N3 616 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 NANOGP1Q8N7R0 232 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 GJC3Q8NFK1 279 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 HAVCR2Q8TDQ0 301 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 SNX33Q8WV41 574 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 YIPF5Q969M3 257 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 TBX5Q99593 518 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 SYT3Q9BQG1 590 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF649Q9BS31 505 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ALG8Q9BVK2 526 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF416Q9BWM5 594 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 NARFLQ9H6Q4 476 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ACOT13Q9NPJ3 140 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF275Q9NSD4 429 aaPredicted RBP7.73□□□□□ -1.17
SF3A1-206ENST00000471037 MYEF2Q9P2K5 600 aaKnown RBP7.73□□□□□ -1.17
SF3A1-206ENST00000471037 ASH2LQ9UBL3 628 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 PCDHB10Q9UN67 800 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 COPS3Q9UNS2 423 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 KLHDC2Q9Y2U9 406 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 CAB39Q9Y376 341 aaPredicted RBP7.73□□□□□ -1.17
SF3A1-206ENST00000471037 LHFPL6Q9Y693 200 aa7.73□□□□□ -1.17
SF3A1-206ENST00000471037 TRIM77I1YAP6 450 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF254O75437 659 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 UBL3O95164 117 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 PTHP01270 115 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 MT-ND5P03915 603 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 KRT8P05787 483 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 PSKH1P11801 424 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 CD79AP11912 226 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 EPHA1P21709 976 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 RPS27P42677 84 aaKnown RBP7.72□□□□□ -1.17
SF3A1-206ENST00000471037 MAP2K4P45985 399 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 HCCSP53701 268 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 WNT4P56705 351 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 RAB1AP62820 205 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 HIST1H3AP68431 136 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 GALK2Q01415 458 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 ROM1Q03395 351 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 EMX1Q04741 257 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-206ENST00000471037 MRPL28Q13084 256 aaKnown RBP7.72□□□□□ -1.17
SF3A1-206ENST00000471037 SPHARQ15513 63 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 SLC36A2Q495M3 483 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 CDONQ4KMG0 1287 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 HIST2H3PS2Q5TEC6 136 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 OTPQ5XKR4 325 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 TMEM154Q6P9G4 183 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 CORO6Q6QEF8 472 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 DEGS2Q6QHC5 323 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 C1orf229Q6ZS94 237 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-206ENST00000471037 KCTD8Q6ZWB6 473 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 HIST2H3AQ71DI3 136 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF367Q7RTV3 350 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 FAM220AQ7Z4H9 259 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 KCTD20Q7Z5Y7 419 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 LRP11Q86VZ4 500 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 LINC00346Q8IVM7 164 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 SKA3Q8IX90 412 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 LRRC18Q8N456 261 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 C3orf56Q8N813 242 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 ST7LQ8TDW4 575 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 THEM6Q8WUY1 208 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 RNF133Q8WVZ7 376 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 RORBQ92753 470 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 GCDHQ92947 438 aaPredicted RBP7.72□□□□□ -1.17
SF3A1-206ENST00000471037 OR8B4Q96RC9 309 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 JMJD8Q96S16 334 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 SH3GL3Q99963 347 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 ABHD6Q9BV23 337 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 LPAR2Q9HBW0 351 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 G6PC2Q9NQR9 355 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 TREM2Q9NZC2 230 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 CLEC2DQ9UHP7 191 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 MEGF8Q7Z7M0 2845 aa7.72□□□□□ -1.17
SF3A1-206ENST00000471037 DYSFO75923 2080 aa7.71□□□□□ -1.17
SF3A1-206ENST00000471037 MGAM2Q2M2H8 2515 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 IGLV3-9A0A075B6K5 115 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 METTL15A6NJ78 407 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF878C9JN71 531 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 PPIHO43447 177 aaKnown RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 MMP7P09237 267 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF32P17041 273 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 JUNBP17275 347 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 RIDAP52758 137 aaKnown RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 TAS2R43P59537 309 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 BDH1Q02338 343 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms