RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ITFG2Q969R8 447 aa12.76□□□□□ -0.37
CDC42SE1-203ENST00000470278 CMBLQ96DG6 245 aa12.76□□□□□ -0.37
CDC42SE1-203ENST00000470278 RHNO1Q9BSD3 238 aa12.76□□□□□ -0.37
CDC42SE1-203ENST00000470278 ALG8Q9BVK2 526 aa12.76□□□□□ -0.37
CDC42SE1-203ENST00000470278 ACOXLQ9NUZ1 547 aa12.76□□□□□ -0.37
CDC42SE1-203ENST00000470278 TAAR3PQ9P1P4 343 aa12.76□□□□□ -0.37
CDC42SE1-203ENST00000470278 ZNF319Q9P2F9 582 aa12.76□□□□□ -0.37
CDC42SE1-203ENST00000470278 FBN1P35555 2871 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 A0A1B0GWJ7 208 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 PLSCR5A0PG75 271 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 C5orf63A6NC05 138 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 IQCF6A8MYZ5 107 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 LOC110117498-PIK3R3F6TDL0 507 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 MAGEB4O15481 346 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 DENRO43583 198 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 XPNPEP2O43895 674 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 TIMM8AO60220 97 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 PNPP00491 289 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 IGLV3-1P01715 115 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 ADH4P08319 380 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 TACSTD2P09758 323 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 LIMS3P0CW19 117 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 LIMS4P0CW20 117 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 MFGE8Q08431 387 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 MRPL28Q13084 256 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 TIGD6Q17RP2 521 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 YIPF7Q8N8F6 280 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 BPIFB6Q8NFQ5 453 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 OR2AE1Q8NHA4 323 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 GGHQ92820 318 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 TRMT61AQ96FX7 289 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 TMEM80Q96HE8 168 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 REEP6Q96HR9 211 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 PGAM5Q96HS1 289 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 CNBD2Q96M20 576 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 PBOV1Q9GZY1 135 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 BARX1Q9HBU1 254 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 G6PC2Q9NQR9 355 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 GNG8Q9UK08 70 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 EXOSC1Q9Y3B2 195 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 SNX5Q9Y5X3 404 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 STAB1Q9NY15 2570 aa12.75□□□□□ -0.37
CDC42SE1-203ENST00000470278 SONP18583 2426 aaKnown RBP12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 USF3Q68DE3 2245 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 C17orf100A8MU93 164 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 TBX1O43435 398 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 ERCC1P07992 297 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 ADRA2AP08913 450 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 MYL12AP19105 171 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 ST3GAL4Q11206 333 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 MED21Q13503 144 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 OR8B8Q15620 311 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 TP53I3Q53FA7 332 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 BCL2L15Q5TBC7 163 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 FDX2Q6P4F2 183 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 LHFPL3Q86UP9 236 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 RORBQ92753 470 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 SGK3Q96BR1 496 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 DIRC2Q96SL1 478 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 RAB1BQ9H0U4 201 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 BRD7Q9NPI1 651 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 NKIRAS2Q9NYR9 191 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
CDC42SE1-203ENST00000470278 ZSCAN5BA6NJL1 495 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 TTRP02766 147 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 DDOSTP39656 456 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 ZNF81P51508 661 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 EFNA4P52798 201 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 OR12D2P58182 307 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 SLC35A2P78381 396 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 FAM3AP98173 230 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 ALKBH6Q3KRA9 238 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 FAM209AQ5JX71 171 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 RNLSQ5VYX0 342 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 OR2T2Q6IF00 324 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 PRSS57Q6UWY2 283 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 AHSA2Q719I0 299 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 CATSPERDQ86XM0 798 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 ELMOD2Q8IZ81 293 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 ZNF540Q8NDQ6 660 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 OR8G5Q8NG78 346 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 NEU4Q8WWR8 484 aaPredicted RBP12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 PERPQ96FX8 193 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 SORCS2Q96PQ0 1159 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 SIGLEC11Q96RL6 698 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 SLC30A2Q9BRI3 323 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 SCN3BQ9NY72 215 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 MRPL15Q9P015 296 aaKnown RBP12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 OR52A1Q9UKL2 312 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 ZDHHC8Q9ULC8 765 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 CAB39Q9Y376 341 aaPredicted RBP12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 N6AMT1Q9Y5N5 214 aa12.73□□□□□ -0.37
CDC42SE1-203ENST00000470278 LOC390937A0A1W2PQ73 354 aa12.72□□□□□ -0.37
CDC42SE1-203ENST00000470278 CD300LBA8K4G0 201 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms