RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 ASCL1P50553 236 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 SLC25A1P53007 311 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 SLC26A5P58743 744 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 RAB1AP62820 205 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 ZP2Q05996 745 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 RPL18Q07020 188 aaKnown RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PDGFRLQ15198 375 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 TMEM268Q5VZI3 342 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PLPP4Q5VZY2 271 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PTCRAQ6ISU1 281 aaPredicted RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 HOGA1Q86XE5 327 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 OTOSQ8NHW6 89 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 PMM1Q92871 262 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 ERGIC1Q969X5 290 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 TSPAN32Q96QS1 320 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 OR8B4Q96RC9 309 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 LPAR4Q99677 370 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 NICN1Q9BSH3 213 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 ST6GALNAC5Q9BVH7 336 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 SH3BGRL3Q9H299 93 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 C19orf12Q9NSK7 152 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 LRIT1Q9P2V4 623 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 MRPS2Q9Y399 296 aaKnown RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 FREM3P0C091 2139 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 FANCMQ8IYD8 2048 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 LOC107986453A0A1B0GWG9 222 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 IFNA10P01566 189 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 MBP02144 154 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 ARFRP1Q13795 201 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 DMRTC1Q5HYR2 192 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 C1QL4Q86Z23 238 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 HIST3H2BBQ8N257 126 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 OR10G6Q8NH81 332 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 LCN9Q8WX39 176 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 THRSPQ92748 146 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 THOC3Q96J01 351 aaKnown RBP8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 SNX22Q96L94 193 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 STACQ99469 402 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 HS3ST3B1Q9Y662 390 aa8.51□□□□□ -1.05
NHLRC3-203ENST00000470258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 H0YL77 283 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 P2RY10O00398 339 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 XRCC2O43543 280 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 SLC16A7O60669 478 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 C8AP07357 584 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 DPTQ07507 201 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 TOMM20Q15388 145 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 FHL5Q5TD97 284 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 GGNBP1Q5YKI7 109 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 SLC18B1Q6NT16 456 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 TMEM182Q6ZP80 229 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 DGAT2L6Q6ZPD8 337 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 POC1AQ8NBT0 407 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 OR4C3Q8NH37 302 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 RAB39BQ96DA2 213 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 MUCL1Q96DR8 90 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 GALNT14Q96FL9 552 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 SPACA7Q96KW9 195 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 WDR92Q96MX6 357 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 GNRHR2Q96P88 292 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 NEU1Q99519 415 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNF700Q9H0M5 742 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 SRMSQ9H3Y6 488 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 BCO1Q9HAY6 547 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 HHLA2Q9UM44 414 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 HCFC2Q9Y5Z7 792 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 COLEC10Q9Y6Z7 277 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 LRRK1Q38SD2 2015 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 A0A1B0GWJ7 208 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 CLDN4O14493 209 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 MPIG6BO95866 241 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 SFTPCP11686 197 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNF708P17019 499 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 AMY2BP19961 511 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 RBMXP38159 391 aaKnown RBP8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 PCP4P48539 62 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 DHPSP49366 369 aaPredicted RBP8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 EMP2P54851 167 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 SLC35A1P78382 337 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 ACY1Q03154 408 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 HAGHQ16775 308 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 OR5H2Q8NGV7 314 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 FGGYQ96C11 551 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 MBNL1Q9NR56 388 aaKnown RBP8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 CENPMQ9NSP4 180 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 RAB22AQ9UL26 194 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 KCNIP3Q9Y2W7 256 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 SPACA6W5XKT8 324 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 SPAG17Q6Q759 2223 aa8.5□□□□□ -1.05
NHLRC3-203ENST00000470258 H3BQ15 152 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 HRKO00198 91 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 EREGO14944 169 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 SCAF4O95104 1147 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 NSA2O95478 260 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 HPGDP15428 266 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 IL2RGP31785 369 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 ERVFRD-1P60508 538 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 SUPT4H1P63272 117 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 UNC119Q13432 240 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms