RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 I3L1I5 382 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 J3QLW9 94 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 CDIPTO14735 213 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 CYB5BO43169 146 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 KCNAB3O43448 404 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TCF21O43680 179 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 LRP3O75074 770 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TNFSF13O75888 250 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 KAT7O95251 611 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SLC25A14O95258 325 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ABHD16AO95870 558 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 GPANK1O95872 356 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 CYB5R3P00387 301 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 CELA3BP08861 270 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 DBHP09172 617 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 NPSP0C0P6 89 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SLC35G6P0C7Q6 338 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 PTHLHP12272 177 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF19P17023 458 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TNFRSF1BP20333 461 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 HSD11B1P28845 292 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 IMPA1P29218 277 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 GNRHRP30968 328 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 PYCR1P32322 319 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 AQP2P41181 271 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 WASP42768 502 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 LPAR6P43657 344 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 OR3A2P47893 321 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 CAMLGP49069 296 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 PITX1P78337 314 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 MEF2AQ02078 507 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 LTBQ06643 244 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 OR5I1Q13606 314 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SLC17A1Q14916 467 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 EBPQ15125 230 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 RAB30Q15771 203 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 HYAL4Q2M3T9 481 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF750Q32MQ0 723 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 Q499Y3 187 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TRMT12Q53H54 448 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 EIPR1Q53HC9 387 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM128Q5BJH2 165 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 RNASE12Q5GAN4 147 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 HLA-DQA1Q5Y7H0 255 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 NCR3LG1Q68D85 454 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 CYB5R2Q6BCY4 276 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM64Q6YI46 380 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 BHLHA15Q7RTS1 189 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TCF24Q7RTU0 167 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 NUP54Q7Z3B4 507 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 MDGA2Q7Z553 956 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 BCDIN3DQ7Z5W3 292 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM150AQ86TG1 271 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 H1FOOQ8IZA3 346 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 KLHDC1Q8N7A1 406 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 BBS1Q8NFJ9 593 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 GPR32P1Q8NGA4 272 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 OR4S1Q8NGB4 309 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 OR4D6Q8NGJ1 314 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 OR2L2Q8NH16 312 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 CPT1CQ8TCG5 803 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ACER1Q8TDN7 264 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ISOC2Q96AB3 205 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 MOB3AQ96BX8 217 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 WDR34Q96EX3 536 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 IGSF21Q96ID5 467 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 RAX2Q96IS3 184 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SLC35E1Q96K37 410 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 C2orf50Q96LR7 162 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 IP6K3Q96PC2 410 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TGM7Q96PF1 710 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 CD180Q99467 661 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SPATA25Q9BR10 227 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 MS4A8Q9BY19 250 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SELENOIQ9C0D9 397 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 KATNBL1Q9H079 304 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 RAB33BQ9H082 229 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 MAGT1Q9H0U3 335 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 MTIF3Q9H2K0 278 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ISG20L2Q9H9L3 353 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 DNAJC4Q9NNZ3 241 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ZDHHC4Q9NPG8 344 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SLC2A9Q9NRM0 540 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SERINC1Q9NRX5 453 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TM7SF3Q9NS93 570 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TDP1Q9NUW8 608 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 POT1Q9NUX5 634 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 PRR13Q9NZ81 148 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 MRPL15Q9P015 296 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 FOXJ2Q9P0K8 574 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 KIAA1456Q9P272 454 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ADAM29Q9UKF5 820 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 PADI1Q9ULC6 663 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SCML2Q9UQR0 700 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 KCNK6Q9Y257 313 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 MRPS33Q9Y291 106 aaKnown RBP4.34□□□□□ -1.71
SF3B1-207ENST00000468925 ENTPD2Q9Y5L3 495 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 SBF1O95248 1867 aa4.34□□□□□ -1.71
SF3B1-207ENST00000468925 TRPM7Q96QT4 1865 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms