RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 COQ8AQ8NI60 647 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 NDNFQ8TB73 568 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 SRSF12Q8WXF0 261 aaKnown RBP2.63□□□□□ -1.99
VPS13A-209ENST00000467124 TCEAL3Q969E4 200 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 FAM104AQ969W3 186 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 PTX4Q96A99 478 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 TMIGD2Q96BF3 282 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 HAUS1Q96CS2 278 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF382Q96SR6 550 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 CDX2Q99626 313 aaPredicted RBP2.63□□□□□ -1.99
VPS13A-209ENST00000467124 GPR21Q99679 349 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 OSBPL11Q9BXB4 747 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 FGF23Q9GZV9 251 aaPredicted RBP2.63□□□□□ -1.99
VPS13A-209ENST00000467124 PARP12Q9H0J9 701 aaKnown RBP2.63□□□□□ -1.99
VPS13A-209ENST00000467124 OR52D1Q9H346 318 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 RBFOX1Q9NWB1 397 aaKnown RBP2.63□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF282Q9UDV7 671 aaPredicted RBP2.63□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF229Q9UJW7 825 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 CES1P1Q9UKY3 287 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 RBMX2Q9Y388 322 aaKnown RBP2.63□□□□□ -1.99
VPS13A-209ENST00000467124 LRP4O75096 1905 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 PALLDQ8WX93 1383 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 IGLV4-69A0A075B6H9 119 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 IGKV1-27A0A075B6S5 117 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 A0A1W2PRF3 423 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 A0A1W2PRM7 423 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 DFFAO00273 331 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 RAD51BO15315 384 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 GCM2O75603 506 aaPredicted RBP2.62□□□□□ -1.99
VPS13A-209ENST00000467124 SEMA3DO95025 777 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 SMC2O95347 1197 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 LCA5LO95447 670 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 GLAP06280 429 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 ADRA2AP08913 450 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 OR56A5P0C7T3 313 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 LCN1P31025 176 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 DEKP35659 375 aaKnown RBP2.62□□□□□ -1.99
VPS13A-209ENST00000467124 POLR2IP36954 125 aaKnown RBP2.62□□□□□ -1.99
VPS13A-209ENST00000467124 SYNJ2BPP57105 145 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 ATP6V1FQ16864 119 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 MPV17L2Q567V2 206 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 LGI3Q8N145 548 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 TRIML2Q8N7C3 387 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 LRRC20Q8TCA0 184 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 C15orf40Q8WUR7 153 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 ING5Q8WYH8 240 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 TMEM159Q96B96 161 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 FLYWCH2Q96CP2 140 aaKnown RBP2.62□□□□□ -1.99
VPS13A-209ENST00000467124 RCN3Q96D15 328 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 CENPNQ96H22 339 aaPredicted RBP2.62□□□□□ -1.99
VPS13A-209ENST00000467124 GGTLC1Q9BX51 225 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 MAP1LC3CQ9BXW4 147 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 VCXQ9H320 206 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 PSG11Q9UQ72 335 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 V9GYY9 64 aa2.62□□□□□ -1.99
VPS13A-209ENST00000467124 RAB19A4D1S5 217 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 PDZK1P1A8MUH7 402 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 FAM25EA8MYX2 175 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 DNASE2O00115 360 aaPredicted RBP2.61□□□□□ -1.99
VPS13A-209ENST00000467124 PSMD11O00231 422 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 SPOPO43791 374 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 REM1O75628 298 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 TACSTD2P09758 323 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 IGHV1-8P0DP01 117 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 MAGP20916 626 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 MYL9P24844 172 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 IVDP26440 423 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 ARL2P36404 184 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 UCNP55089 124 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 ESRRGP62508 458 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 TNNC1P63316 161 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 SLC35B1P78383 322 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 LRRC63Q05C16 580 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 CHRFAM7AQ494W8 412 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 DUPD1Q68J44 220 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 Q6P435 159 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 NTM-AS1Q6ZSK4 140 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 NDUFAF7Q7L592 441 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 LINC01551Q86U37 167 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 CDKL3Q8IVW4 592 aaPredicted RBP2.61□□□□□ -1.99
VPS13A-209ENST00000467124 OR4K5Q8NGD3 323 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 OR6N1Q8NGY5 312 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 OR51A7Q8NH64 312 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 RXFP4Q8TDU9 374 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 RERGQ96A58 199 aaPredicted RBP2.61□□□□□ -1.99
VPS13A-209ENST00000467124 EXOSC8Q96B26 276 aaKnown RBP2.61□□□□□ -1.99
VPS13A-209ENST00000467124 BTN2A3PQ96KV6 586 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 LINC00167Q96N53 147 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 NDFIP1Q9BT67 221 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 SLC17A9Q9BYT1 436 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF442Q9H7R0 627 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 LHX9Q9NQ69 397 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 OR51B2Q9Y5P1 312 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 CARMIL3Q8ND23 1372 aa2.61□□□□□ -1.99
VPS13A-209ENST00000467124 FHOD3Q2V2M9 1422 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 IGLV3-16A0A075B6K0 115 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 TRAV8-7A0A075B6U6 113 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 A0A0B4J2E0 115 aa2.6□□□□□ -1.99
VPS13A-209ENST00000467124 LOC100506127A0A0U1RQW1 187 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms