RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 DHRS7CA6NNS2 312 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 B9A039 149 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 E9PI62 339 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 OGG1O15527 345 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 CD1AP06126 327 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 SELEP16581 610 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 LIPAP38571 399 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 DDOSTP39656 456 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 PSMB10P40306 273 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 KIR3DL2P43630 455 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 PSG7Q13046 419 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 CDK5R1Q15078 307 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 OR8B8Q15620 311 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 SWI5Q1ZZU3 235 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 AGAP6Q5VW22 663 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 HIST2H2BCQ6DN03 193 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 KRT74Q7RTS7 529 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 ZNF367Q7RTV3 350 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 MRPL21Q7Z2W9 205 aaKnown RBP13.02□□□□□ -0.33
NPHP4-205ENST00000466897 KLBQ86Z14 1044 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 PLPP7Q8NBV4 271 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 OR2AE1Q8NHA4 323 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 IGFBPL1Q8WX77 278 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 GATAD2BQ8WXI9 593 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 SMIM19Q96E16 107 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 MRPL37Q9BZE1 423 aaKnown RBP13.02□□□□□ -0.33
NPHP4-205ENST00000466897 CBLN4Q9NTU7 201 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 PTTG3PQ9NZH4 202 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 GPR160Q9UJ42 338 aa13.02□□□□□ -0.33
NPHP4-205ENST00000466897 FBN2P35556 2912 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 IQCF6A8MYZ5 107 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 LALBAP00709 142 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 PCMT1P22061 227 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 MPV17P39210 176 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 FAM3AP98173 230 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 EMX1Q04741 257 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-205ENST00000466897 HLXQ14774 488 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-205ENST00000466897 MST1LQ2TV78 715 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 TMEM244Q5VVB8 128 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 DMKNQ6E0U4 476 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-205ENST00000466897 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 CMBLQ96DG6 245 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 LYZL4Q96KX0 146 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 OR5M11Q96RB7 305 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 UBTD1Q9HAC8 227 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 CYSLTR2Q9NS75 346 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 PURGQ9UJV8 347 aaKnown RBP13.01□□□□□ -0.33
NPHP4-205ENST00000466897 GTF2A1LQ9UNN4 478 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 SLC22A13Q9Y226 551 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 N6AMT1Q9Y5N5 214 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 LRBAP50851 2863 aa13.01□□□□□ -0.33
NPHP4-205ENST00000466897 CHD3Q12873 2000 aaKnown RBP13□□□□□ -0.33
NPHP4-205ENST00000466897 A0A087WXM4 84 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 TRBV2A0A0J9YWF9 115 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 A0A1B0GTI1 187 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 A0A1B0GWJ7 208 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 TRIM64CA6NLI5 447 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 PLPP2O43688 288 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 MTRF1O75570 445 aaKnown RBP13□□□□□ -0.33
NPHP4-205ENST00000466897 DHRS3O75911 302 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 ZFPL1O95159 310 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 PRF1P14222 555 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 ZNF12P17014 697 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 GTF2A1P52655 376 aaPredicted RBP13□□□□□ -0.33
NPHP4-205ENST00000466897 CDH15P55291 814 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 SNRPD2P62316 118 aaKnown RBP13□□□□□ -0.33
NPHP4-205ENST00000466897 MLLT11Q13015 90 aaPredicted RBP13□□□□□ -0.33
NPHP4-205ENST00000466897 GPR50Q13585 617 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 MED22Q15528 200 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 ZMAT1Q5H9K5 638 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 TMEM255AQ5JRV8 349 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 ZBTB37Q5TC79 503 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 UBE2UQ5VVX9 321 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 XAF1Q6GPH4 301 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 DOK3Q7L591 496 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 CSNK2A3Q8NEV1 391 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 TSPAN14Q8NG11 270 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 OR51E1Q8TCB6 317 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 TRAF4Q9BUZ4 470 aaPredicted RBP13□□□□□ -0.33
NPHP4-205ENST00000466897 COMMD4Q9H0A8 199 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 GPR84Q9NQS5 396 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 DUSP13Q9UII6 198 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 EDARQ9UNE0 448 aa13□□□□□ -0.33
NPHP4-205ENST00000466897 CD300LBA8K4G0 201 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 CLPTM1O96005 669 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 CD8AP01732 235 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 SOD3P08294 240 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 BMP4P12644 408 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 CD53P19397 219 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 ACHEP22303 614 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 GSK3AP49840 483 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 PPOXP50336 477 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 MMP15P51511 669 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 DOC2BQ14184 412 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 PAMR1Q6UXH9 720 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 LRP11Q86VZ4 500 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 FTMTQ8N4E7 242 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 OR5AK2Q8NH90 309 aa12.99□□□□□ -0.33
NPHP4-205ENST00000466897 PPP1R14AQ96A00 147 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms