RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SGTBQ96EQ0 304 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 GALNT14Q96FL9 552 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 SCGB3A2Q96PL1 93 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF317Q96PQ6 595 aaPredicted RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 GPR21Q99679 349 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 UQCC2Q9BRT2 126 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF2Q9BSG1 426 aaPredicted RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 MAP1LC3CQ9BXW4 147 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 PARP12Q9H0J9 701 aaKnown RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 RAB1BQ9H0U4 201 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ARMC7Q9H6L4 198 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ANKHQ9HCJ1 492 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CSNK1G1Q9HCP0 422 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 TREM1Q9NP99 234 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 UVRAGQ9P2Y5 699 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CD84Q9UIB8 345 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 COL22A1Q8NFW1 1626 aaPredicted RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 OR6C74A6NCV1 312 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 E7EWF7 191 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 H7C417 338 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 DFFAO00273 331 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 PRMT5O14744 637 aaPredicted RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC16A7O60669 478 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 VAPBO95292 243 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 LCA5LO95447 670 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 GLAP06280 429 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 RHOCP08134 193 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 PGA4P0DJD7 388 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 PGA3P0DJD8 388 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 TCP1P17987 556 aaKnown RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ATF6P18850 670 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CD9P21926 228 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 HTR2CP28335 458 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 PFN2P35080 140 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ARR3P36575 388 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 SPAM1P38567 509 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CEACAM6P40199 344 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CDKN2BP42772 138 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CXCL5P42830 114 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 PPICP45877 212 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 NMUP48645 174 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 UBE2AP49459 152 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 AP1S2P56377 157 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 PAFAH1B2P68402 229 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC35B1P78383 322 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 HMGCS1Q01581 520 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 XRCC4Q13426 336 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF266Q14584 549 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 GINS1Q14691 196 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ANGPT1Q15389 498 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 RGNQ15493 299 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ATP6V1FQ16864 119 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 TMEM183BQ1AE95 376 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 DEFB116Q30KQ4 102 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 NDUFAF6Q330K2 333 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CHRFAM7AQ494W8 412 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ABCA11PQ4W5N1 156 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 HES5Q5TA89 166 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC25A34Q6PIV7 304 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 DEGS2Q6QHC5 323 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 PLET1Q6UQ28 207 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 LYPD2Q6UXB3 125 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 TMPRSS11AQ6ZMR5 421 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 NDUFAF7Q7L592 441 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 C12orf56Q8IXR9 622 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 TMEM183AQ8IXX5 376 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 SYS1Q8N2H4 156 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 METTL13Q8N6R0 699 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 NPWQ8N729 165 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 OR10AD1Q8NGE0 317 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 OR4D6Q8NGJ1 314 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ZFP90Q8TF47 636 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 DCPSQ96C86 337 aaKnown RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 RCN3Q96D15 328 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CENPNQ96H22 339 aaPredicted RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CEP170P1Q96L14 293 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 RNF145Q96MT1 663 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 WFIKKN1Q96NZ8 548 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 TAAR1Q96RJ0 339 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 NAPGQ99747 312 aaPredicted RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 KCNS3Q9BQ31 491 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 LZTS2Q9BRK4 669 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 UTP23Q9BRU9 249 aaKnown RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 AGMATQ9BSE5 352 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 HDHD3Q9BSH5 251 aaPredicted RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC25A2Q9BXI2 301 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CHRNA10Q9GZZ6 450 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 LINC00597Q9H2U6 94 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 IFI27L2Q9H2X8 130 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 CDC42EP4Q9H3Q1 356 aaKnown RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 EDA2RQ9HAV5 297 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 LHX9Q9NQ69 397 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF302Q9NR11 478 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 FAM49BQ9NUQ9 324 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNHIT6Q9NWK9 470 aaKnown RBP1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 STMN3Q9NZ72 180 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC17A7Q9P2U7 560 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 MTFP1Q9UDX5 166 aa1.3□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF229Q9UJW7 825 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms