RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 PLPP7Q8NBV4 271 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 SLAMF6Q96DU3 332 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 TRIM15Q9C019 465 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 CENPMQ9NSP4 180 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 C1orf123Q9NWV4 160 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 NDE1Q9NXR1 346 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 N6AMT1Q9Y5N5 214 aa15.92■□□□□ 0.14
COL9A3-206ENST00000466532 ADAM20O43506 726 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 CCNB2O95067 398 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 GYPBP06028 91 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 GRPP07492 148 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 SLC2A1P11166 492 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 MDKP21741 143 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-206ENST00000466532 OMGP23515 440 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 FMO3P31513 532 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 CRMP1Q14194 572 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 SPATS1Q496A3 300 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 RUSC1-AS1Q66K80 236 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 ZNF770Q6IQ21 691 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-206ENST00000466532 SPERTQ8NA61 448 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 ZNF511Q8NB15 262 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 AQP11Q8NBQ7 271 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 OR56B2PQ8NGI1 322 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 TMIGD2Q96BF3 282 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 KCNJ15Q99712 375 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 PRDM13Q9H4Q3 707 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 TRIM36Q9NQ86 728 aa15.91■□□□□ 0.14
COL9A3-206ENST00000466532 TRAV38-1A0A0B4J264 116 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-206ENST00000466532 OOEPA6NGQ2 149 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 A6NLC8 198 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 SRRM5B3KS81 715 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 ZNF879B4DU55 563 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 ZNF878C9JN71 531 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 ZNF593O00488 134 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-206ENST00000466532 SFTPBP07988 381 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 ATP6V1B2P21281 511 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 CFHR2P36980 270 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 BPIFB3P59826 476 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 PPP1R8Q12972 351 aaKnown RBP15.9■□□□□ 0.14
COL9A3-206ENST00000466532 ZNF826PQ6ZT77 177 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 TSSK6Q9BXA6 273 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 OPA3Q9H6K4 179 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 TNFRSF19Q9NS68 423 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 ACTR3BQ9P1U1 418 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 KIF17Q9P2E2 1029 aa15.9■□□□□ 0.14
COL9A3-206ENST00000466532 hCG_1807616A0A1W2PRN6 198 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 P2RY10O00398 339 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 ATP8B1O43520 1251 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 XRCC2O43543 280 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 NDUFA2O43678 99 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 TOX4O94842 621 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 LIPFP07098 398 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 SPI1P17947 270 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 MAGEA2P43356 314 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 MZT1Q08AG7 82 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 PCK2Q16822 640 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 GCSAMQ8N6F7 178 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 PNLDC1Q8NA58 520 aaKnown RBP15.89■□□□□ 0.13
COL9A3-206ENST00000466532 OR6K6Q8NGW6 343 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 OR4Q3Q8NH05 313 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 NMNAT2Q9BZQ4 307 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 SLITRK2Q9H156 845 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 RASSF4Q9H2L5 321 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 MARCH7Q9H992 704 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 SMURF1Q9HCE7 757 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 C14orf119Q9NWQ9 140 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 BAIAP2Q9UQB8 552 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 ARL2BPQ9Y2Y0 163 aa15.89■□□□□ 0.13
COL9A3-206ENST00000466532 FAM181BA6NEQ2 426 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 TNFRSF13BO14836 293 aaPredicted RBP15.88■□□□□ 0.13
COL9A3-206ENST00000466532 TBX1O43435 398 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 DCTN3O75935 186 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 SOX14O95416 240 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 GYPAP02724 150 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 CLUP10909 449 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 SLC25A1P53007 311 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 TEX30Q5JUR7 227 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 Q6YL49 198 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 OR2T33Q8NG76 320 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 OR8S1Q8NH09 359 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 WDFY2Q96P53 400 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 TBX15Q96SF7 602 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 NOX4Q9NPH5 578 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 ARMC1Q9NVT9 282 aa15.88■□□□□ 0.13
COL9A3-206ENST00000466532 CENPVL3A0A0U1RRI6 287 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 DHRS12A0PJE2 317 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 ANKRD30BLA7E2S9 258 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 KCNAB3O43448 404 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 ANXA2P07355 339 aaKnown RBP15.87■□□□□ 0.13
COL9A3-206ENST00000466532 MMP9P14780 707 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 DDOSTP39656 456 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 SLC15A1P46059 708 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 CX3CR1P49238 355 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 GRB2P62993 217 aaKnown RBP15.87■□□□□ 0.13
COL9A3-206ENST00000466532 EIF2B1Q14232 305 aaKnown RBP15.87■□□□□ 0.13
COL9A3-206ENST00000466532 TIGD6Q17RP2 521 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 METTL11BQ5VVY1 283 aa15.87■□□□□ 0.13
COL9A3-206ENST00000466532 FIP1L1Q6UN15 594 aaKnown RBP15.87■□□□□ 0.13
COL9A3-206ENST00000466532 TREML4Q6UXN2 200 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms