RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 FAM3AP98173 230 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 MFGE8Q08431 387 aaPredicted RBP17.26■□□□□ 0.35
PTCD3-206ENST00000465560 TNK1Q13470 666 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 ZNF786Q8N393 782 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 ACBD7Q8N6N7 88 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 YIPF7Q8N8F6 280 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 OR13G1Q8NGZ3 307 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 C10orf105Q8TEF2 133 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 SPRYD4Q8WW59 207 aaPredicted RBP17.26■□□□□ 0.35
PTCD3-206ENST00000465560 MOB1AQ9H8S9 216 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 SAP30LQ9HAJ7 183 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 DECR2Q9NUI1 292 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 ZNF391Q9UJN7 358 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 R4GMQ9 66 aa17.26■□□□□ 0.35
PTCD3-206ENST00000465560 IGHV4-30-2A0A087WSY4 118 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 A0A1B0GWJ7 208 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 LOC390937A0A1W2PQ73 354 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 DAPL1A0PJW8 107 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 NDUFS8O00217 210 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 TPD52L2O43399 206 aaKnown RBP17.25■□□□□ 0.35
PTCD3-206ENST00000465560 RRP9O43818 475 aaKnown RBP17.25■□□□□ 0.35
PTCD3-206ENST00000465560 FADS2O95864 444 aaKnown RBP17.25■□□□□ 0.35
PTCD3-206ENST00000465560 PNPP00491 289 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 IGHA1P01876 353 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 GFOD2Q3B7J2 385 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 CDONQ4KMG0 1287 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 KLHL22Q53GT1 634 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 C6orf52Q5T4I8 152 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 PLEKHG7Q6ZR37 379 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 OR2Z1Q8NG97 314 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 OR56B2PQ8NGI1 322 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 FBLIM1Q8WUP2 373 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 RDH5Q92781 318 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 ELMOD3Q96FG2 381 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 TMUB1Q9BVT8 246 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 PBOV1Q9GZY1 135 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 TMEM100Q9NV29 134 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 NUFIP1Q9UHK0 495 aaKnown RBP17.25■□□□□ 0.35
PTCD3-206ENST00000465560 MYRFQ9Y2G1 1151 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 DYSFO75923 2080 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 ACANP16112 2415 aa17.25■□□□□ 0.35
PTCD3-206ENST00000465560 A0A0U1RQV5 110 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 LOC110117498-PIK3R3F6TDL0 507 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 TNFSF4P23510 183 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 DDOSTP39656 456 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 TNFAIP6P98066 277 aaPredicted RBP17.24■□□□□ 0.35
PTCD3-206ENST00000465560 CARTPTQ16568 116 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 LIPNQ5VXI9 398 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 IZUMO2Q6UXV1 221 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 FAM220AQ7Z4H9 259 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 THAP5Q7Z6K1 395 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 OR52I1Q8NGK6 324 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 EGLN1Q9GZT9 426 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 G6PC2Q9NQR9 355 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 INPP5EQ9NRR6 644 aa17.24■□□□□ 0.35
PTCD3-206ENST00000465560 MRPL15Q9P015 296 aaKnown RBP17.24■□□□□ 0.35
PTCD3-206ENST00000465560 IRGMA1A4Y4 181 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 LYNX1G3V0Z9 82 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 MLNRO43193 412 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 FAM20BO75063 409 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 RPP14O95059 124 aaKnown RBP17.23■□□□□ 0.35
PTCD3-206ENST00000465560 LYNX1P0DP58 116 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 ACHEP22303 614 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 ACTA2P62736 377 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 ACTG2P63267 376 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 OR8B8Q15620 311 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 TP53I3Q53FA7 332 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 KCTD20Q7Z5Y7 419 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 OR10AD1Q8NGE0 317 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 YIPF5Q969M3 257 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 LYZL4Q96KX0 146 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 SIGLEC11Q96RL6 698 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 MYCBPQ99417 103 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-206ENST00000465560 PIMREGQ9BSJ6 248 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 SLC22A4Q9H015 551 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 FGF20Q9NP95 211 aaPredicted RBP17.23■□□□□ 0.35
PTCD3-206ENST00000465560 DLL4Q9NR61 685 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 ACOXLQ9NUZ1 547 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 IL19Q9UHD0 177 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 GNG8Q9UK08 70 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 OR52A1Q9UKL2 312 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 SNX5Q9Y5X3 404 aa17.23■□□□□ 0.35
PTCD3-206ENST00000465560 YLPM1P49750 1951 aaKnown RBP17.22■□□□□ 0.35
PTCD3-206ENST00000465560 IGHV1-69-2A0A0G2JMI3 117 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 VWC2LB2RUY7 222 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 H7C1Q1 480 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 IGLV3-1P01715 115 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 TTRP02766 147 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 CD99P14209 185 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 SLC25A16P16260 332 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 COL8A2P25067 703 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 GIFP27352 417 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 CRYBB2P43320 205 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 HSPA13P48723 471 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 GSK3AP49840 483 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 GALEQ14376 348 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 SPRNQ5BIV9 151 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 BCL2L15Q5TBC7 163 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 LAIR2Q6ISS4 152 aa17.22■□□□□ 0.35
PTCD3-206ENST00000465560 RORBQ92753 470 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms