RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ZNF283Q8N7M2 679 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 OR4K15Q8NH41 348 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 KCNG3Q8TAE7 436 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 CCDC74BQ96LY2 380 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 GPER1Q99527 375 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 HDGFL3Q9Y3E1 203 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 ADAMTS9Q9P2N4 1935 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 OR2AT4A6NND4 320 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 SULT2B1O00204 365 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 TLX3O43711 291 aaPredicted RBP16.21■□□□□ 0.19
SYNE4-204ENST00000465425 IL2RAP01589 272 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 STARP49675 285 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 ATXN7L3Q14CW9 347 aaPredicted RBP16.21■□□□□ 0.19
SYNE4-204ENST00000465425 PRAMEF20Q5VT98 475 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 LCN10Q6JVE6 187 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 KCTD9Q7L273 389 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 HSD17B13Q7Z5P4 300 aaPredicted RBP16.21■□□□□ 0.19
SYNE4-204ENST00000465425 RAB3CQ96E17 227 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 VRK1Q99986 396 aaPredicted RBP16.21■□□□□ 0.19
SYNE4-204ENST00000465425 LPAR5Q9H1C0 372 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 B3GALT1Q9Y5Z6 326 aa16.21■□□□□ 0.19
SYNE4-204ENST00000465425 LGALS8O00214 317 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 FGF2P09038 288 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 DLSTP36957 453 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 GUCA1AP43080 201 aaPredicted RBP16.2■□□□□ 0.18
SYNE4-204ENST00000465425 FAM57BQ71RH2 274 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 RELL2Q8NC24 303 aaPredicted RBP16.2■□□□□ 0.18
SYNE4-204ENST00000465425 BVESQ8NE79 360 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 THAP6Q8TBB0 222 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 ELP5Q8TE02 316 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 SOX7Q9BT81 388 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 TMEM59Q9BXS4 323 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 D6RAR5 112 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 TP53I11O14683 189 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 SSX5O60225 188 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 RAMP1O60894 148 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 HLA-GP17693 338 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 FKBP2P26885 142 aaKnown RBP16.2■□□□□ 0.18
SYNE4-204ENST00000465425 ADH6P28332 368 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 AVPR2P30518 371 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 OR3A4PP47883 348 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 ATP1B3P54709 279 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 TAGLNQ01995 201 aaKnown RBP16.2■□□□□ 0.18
SYNE4-204ENST00000465425 JMJD6Q6NYC1 403 aaPredicted RBP16.2■□□□□ 0.18
SYNE4-204ENST00000465425 OR5AS1Q8N127 324 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 WDSUB1Q8N9V3 476 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 TMEM104Q8NE00 496 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 PXT1Q8NFP0 134 aa16.2■□□□□ 0.18
SYNE4-204ENST00000465425 AQP7P3A6NL99 342 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 CDC14BO60729 498 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 HPP00738 406 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 HOXD4P09016 255 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 GSTP1P09211 210 aaKnown RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 DHPSP49366 369 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 LUMP51884 338 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 GRB2P62993 217 aaKnown RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 FAM189A2Q15884 450 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 SMUG1Q53HV7 270 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 ACOT7LQ6ZUV0 252 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 DOK3Q7L591 496 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 RNF144BQ7Z419 303 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 ADAD2Q8NCV1 583 aaKnown RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 DMRTA2Q96SC8 542 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 ZNF471Q9BX82 626 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 BANF2Q9H503 90 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 ZNF319Q9P2F9 582 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 PHF3Q92576 2039 aaKnown RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 K7ESF4 209 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 BCL2L11O43521 198 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 SIGLEC6O43699 453 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 CRTAPO75718 401 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 DUS4LO95620 317 aaKnown RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 NR2C1P13056 603 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 HIST1H1DP16402 221 aaKnown RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 CLDN17P56750 224 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 SLC35A1P78382 337 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 BEX5Q5H9J7 111 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 PTCRAQ6ISU1 281 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 RTN4RL2Q86UN3 420 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 SPERTQ8NA61 448 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 INO80EQ8NBZ0 244 aaPredicted RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 OR10K1Q8NGX5 313 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 MARCH1Q8TCQ1 289 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 SLC26A1Q9H2B4 701 aa16.19■□□□□ 0.18
SYNE4-204ENST00000465425 PNRC2Q9NPJ4 139 aaKnown RBP16.19■□□□□ 0.18
SYNE4-204ENST00000465425 SOCS1O15524 211 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 EFSO43281 561 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 TAS2R31P59538 309 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 SGCAQ16586 387 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 HIST3H3Q16695 136 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 PXDC1Q5TGL8 231 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 LYSMD4Q5XG99 296 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 A0A0A6YYD4 124 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 C5orf51A6NDU8 294 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 EEF1E1-BLOC1S5C9J1V9 151 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 ONECUT2O95948 504 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 KCNMB1Q16558 191 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 FAM74A1Q5RGS3 127 aa16.18■□□□□ 0.18
SYNE4-204ENST00000465425 NAA40Q86UY6 237 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms