RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ZNF85Q03923 595 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 SPOCK1Q08629 439 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 CLEC2AQ6UVW9 174 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 COLCA1Q6ZS62 124 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 PRSS48Q7RTY5 328 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 MYPOPQ86VE0 399 aaPredicted RBP14.97□□□□□ -0.01
CPSF4-209ENST00000465132 PHC2Q8IXK0 858 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 CCDC54Q8NEL0 328 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 OR52N1Q8NH53 320 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 AMELYQ99218 206 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 MND1Q9BWT6 205 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 CDCA4Q9BXL8 241 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 R4GMQ9 66 aa14.97□□□□□ -0.01
CPSF4-209ENST00000465132 CUBNO60494 3623 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 MXRA5Q9NR99 2828 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 LOC110117498-PIK3R3F6TDL0 507 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 J3QLW9 94 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 TNFAIP8O95379 198 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 HTR1AP08908 422 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 DBHP09172 617 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 FAM157BP0CG42 384 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 PSKH1P11801 424 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 ZNF19P17023 458 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 LIPAP38571 399 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 TAS2R43P59537 309 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 HGFACQ04756 655 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 TIGD6Q17RP2 521 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 TMEM249Q2WGJ8 235 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 CCDC58Q4VC31 144 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 BCL2L15Q5TBC7 163 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 LAIR2Q6ISS4 152 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 MUC15Q8N387 334 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 FTMTQ8N4E7 242 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 SVOPQ8N4V2 548 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 SYNPRQ8TBG9 265 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 SLC7A6Q92536 515 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 CCDC90BQ9GZT6 254 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 TRIM36Q9NQ86 728 aa14.96□□□□□ -0.01
CPSF4-209ENST00000465132 CGGBP1Q9UFW8 167 aaPredicted RBP14.96□□□□□ -0.01
CPSF4-209ENST00000465132 MRM2Q9UI43 246 aaKnown RBP14.96□□□□□ -0.01
CPSF4-209ENST00000465132 B9A039 149 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 TBX1O43435 398 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 MTRF1O75570 445 aaKnown RBP14.95□□□□□ -0.02
CPSF4-209ENST00000465132 LIMS3P0CW19 117 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 LIMS4P0CW20 117 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 RAC2P15153 192 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF12P17014 697 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 SERPINF1P36955 418 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 KLF3P57682 345 aaPredicted RBP14.95□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF121P58317 390 aaPredicted RBP14.95□□□□□ -0.02
CPSF4-209ENST00000465132 LOXL1Q08397 574 aaPredicted RBP14.95□□□□□ -0.02
CPSF4-209ENST00000465132 RSPO1Q2MKA7 263 aaPredicted RBP14.95□□□□□ -0.02
CPSF4-209ENST00000465132 ZMAT1Q5H9K5 638 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF684Q5T5D7 378 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 LIPNQ5VXI9 398 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 PAQR4Q8N4S7 273 aaPredicted RBP14.95□□□□□ -0.02
CPSF4-209ENST00000465132 TMEM158Q8WZ71 300 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 C4orf36Q96KX1 117 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 PLK3Q9H4B4 646 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 CYSLTR2Q9NS75 346 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 UBAP1Q9NZ09 502 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 NUFIP1Q9UHK0 495 aaKnown RBP14.95□□□□□ -0.02
CPSF4-209ENST00000465132 GTF2A1LQ9UNN4 478 aa14.95□□□□□ -0.02
CPSF4-209ENST00000465132 NOP16Q9Y3C1 178 aaKnown RBP14.95□□□□□ -0.02
CPSF4-209ENST00000465132 A0A0U1RQV5 110 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 H7C417 338 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 PSMD9O00233 223 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 ERCC1P07992 297 aaPredicted RBP14.94□□□□□ -0.02
CPSF4-209ENST00000465132 FAM157CP0CG43 387 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 ATP6V1B1P15313 513 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 THBS4P35443 961 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 DDOSTP39656 456 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 WNT5AP41221 380 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 ETV1P50549 477 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 CCR9P51686 369 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 CHN2P52757 468 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 KCTD21Q4G0X4 260 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 TP53I3Q53FA7 332 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 MBNL2Q5VZF2 373 aaKnown RBP14.94□□□□□ -0.02
CPSF4-209ENST00000465132 FDX2Q6P4F2 183 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 VHLLQ6RSH7 139 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 FBXW12Q6X9E4 464 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 FAM57BQ71RH2 274 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 PGAP1Q75T13 922 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 SSX6Q7RTT6 188 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 MRPL21Q7Z2W9 205 aaKnown RBP14.94□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF101Q8IZC7 436 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF525Q8N782 197 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 NR1H4Q96RI1 486 aaPredicted RBP14.94□□□□□ -0.02
CPSF4-209ENST00000465132 TTTY10Q9BZA0 68 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 BABAM2Q9NXR7 383 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 CDC42EP3Q9UKI2 254 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 OR52A1Q9UKL2 312 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 STARD10Q9Y365 291 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 PMF1-BGLAPU3KQ54 211 aa14.94□□□□□ -0.02
CPSF4-209ENST00000465132 PLSCR5A0PG75 271 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 RPP14O95059 124 aaKnown RBP14.93□□□□□ -0.02
CPSF4-209ENST00000465132 OR4A8P0C604 315 aa14.93□□□□□ -0.02
CPSF4-209ENST00000465132 UBCP0CG48 685 aaKnown RBP14.93□□□□□ -0.02
CPSF4-209ENST00000465132 ZNF250P15622 560 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms