RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CNR1P21554 472 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 KDELR2P33947 212 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 EVI2BP34910 448 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 GPR6P46095 362 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-205ENST00000464541 FBXW4P57775 412 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 GPX6P59796 221 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 ACTA2P62736 377 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 ACTC1P68032 377 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 SLAMF1Q13291 335 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 MED21Q13503 144 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 TRAM2Q15035 370 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 PSMD5Q16401 504 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 ATP6V1FQ16864 119 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 THEM4Q5T1C6 240 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 ADNP2Q6IQ32 1131 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 CLEC18BQ6UXF7 455 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 Q6ZSR3 168 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 OR5K2Q8NHB8 316 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 SLC7A13Q8TCU3 470 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 CXorf40AQ8TE69 158 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 LRRC58Q96CX6 371 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 KCTD14Q9BQ13 255 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-205ENST00000464541 C1orf198Q9H425 327 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 METTL8Q9H825 291 aaKnown RBP3.33□□□□□ -1.88
PTCD3-205ENST00000464541 FGF20Q9NP95 211 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-205ENST00000464541 SLC39A1Q9NY26 324 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 CD84Q9UIB8 345 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 LSM7Q9UK45 103 aaKnown RBP3.33□□□□□ -1.88
PTCD3-205ENST00000464541 NFASCO94856 1347 aa3.33□□□□□ -1.88
PTCD3-205ENST00000464541 LRP4O75096 1905 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 IGHV3-66A0A0C4DH42 116 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 TSPAN11A1L157 253 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 FABP12A6NFH5 140 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 GOLGA6L10A6NI86 522 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 VGLL3A8MV65 326 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 F8VP50 259 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 PRAMEF26H0Y7S4 382 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 PLPP1O14494 284 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 EEDO75530 441 aaKnown RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 OR5F1O95221 314 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 SLC2A5P22732 501 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 SSR4P51571 173 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 UGT2B15P54855 530 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 UBE2MP61081 183 aaKnown RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 MRPS25P82663 173 aaKnown RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 TNXAQ16473 311 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 RPEL1Q2QD12 228 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 PAGE2Q7Z2X7 111 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 SETD3Q86TU7 594 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 PDIK1LQ8N165 341 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 NOXO1Q8NFA2 376 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 OR56A4Q8NGH8 313 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 OR10G4Q8NGN3 311 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 ITFG1Q8TB96 612 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 PHF10Q8WUB8 498 aaKnown RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 IFT81Q8WYA0 676 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 FRZBQ92765 325 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 CCDC127Q96BQ5 260 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 CENPNQ96H22 339 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 UTP23Q9BRU9 249 aaKnown RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 COPS4Q9BT78 406 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 TMEM59Q9BXS4 323 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 RPP21Q9H633 154 aaKnown RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 NOX3Q9HBY0 568 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 C6orf50Q9HD87 102 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 SLC40A1Q9NP59 571 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 SLCO1B3Q9NPD5 702 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 PRSS16Q9NQE7 514 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 CLEC2DQ9UHP7 191 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 NXT1Q9UKK6 140 aaKnown RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 F11RQ9Y624 299 aaKnown RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 UBN2Q6ZU65 1347 aa3.32□□□□□ -1.88
PTCD3-205ENST00000464541 POLR3AO14802 1390 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-205ENST00000464541 PIKFYVEQ9Y2I7 2098 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 ZCCHC6Q5VYS8 1495 aaKnown RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 JCADQ9P266 1359 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 LYRM9A8MSI8 78 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 CCL21O00585 134 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 TOX3O15405 576 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 B4GALT5O43286 388 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 TRAPPC3O43617 180 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 MPDU1O75352 247 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 SC5DO75845 299 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 LSM8O95777 96 aaKnown RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 CD160O95971 181 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 HBE1P02100 147 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 FGGP02679 453 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 OCM2P0CE71 109 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 CRISP1P54107 249 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 TAS2R60P59551 318 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 DSTNP60981 165 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 UBE2KP61086 200 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 ATP6V0D1P61421 351 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 RPS15AP62244 130 aaKnown RBP3.31□□□□□ -1.88
PTCD3-205ENST00000464541 AQP6Q13520 282 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 MOBPQ13875 183 aa3.31□□□□□ -1.88
PTCD3-205ENST00000464541 SNCBQ16143 134 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms