RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 TRIM36Q9NQ86 728 aa18.69■□□□□ 0.58
USP4-208ENST00000464168 C1orf123Q9NWV4 160 aa18.69■□□□□ 0.58
USP4-208ENST00000464168 MRPL15Q9P015 296 aaKnown RBP18.69■□□□□ 0.58
USP4-208ENST00000464168 KCNG2Q9UJ96 466 aa18.69■□□□□ 0.58
USP4-208ENST00000464168 SAMD4AQ9UPU9 718 aaKnown RBP18.69■□□□□ 0.58
USP4-208ENST00000464168 A0A0U1RQK1 487 aa18.68■□□□□ 0.58
USP4-208ENST00000464168 GGT3PA6NGU5 568 aa18.68■□□□□ 0.58
USP4-208ENST00000464168 OTX1P32242 354 aaPredicted RBP18.68■□□□□ 0.58
USP4-208ENST00000464168 RPS27P42677 84 aaKnown RBP18.68■□□□□ 0.58
USP4-208ENST00000464168 IER3P46695 156 aa18.68■□□□□ 0.58
USP4-208ENST00000464168 PSME3P61289 254 aa18.68■□□□□ 0.58
USP4-208ENST00000464168 GLYATL3Q5SZD4 288 aa18.68■□□□□ 0.58
USP4-208ENST00000464168 SLC35F1Q5T1Q4 408 aa18.68■□□□□ 0.58
USP4-208ENST00000464168 BTN2A1Q7KYR7 527 aa18.68■□□□□ 0.58
USP4-208ENST00000464168 GCSAMQ8N6F7 178 aa18.68■□□□□ 0.58
USP4-208ENST00000464168 ARGLU1Q9NWB6 273 aaPredicted RBP18.68■□□□□ 0.58
USP4-208ENST00000464168 DVL1O14640 695 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 CCDC22O60826 627 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 CLPXO76031 633 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 GADD45GO95257 159 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 LHBP01229 141 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 GRPP07492 148 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 PROK1P58294 105 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 SMIM11AP58511 58 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 POU4F2Q12837 409 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 LDLRAD3Q86YD5 345 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 SPERTQ8NA61 448 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 DDOQ99489 341 aa18.67■□□□□ 0.58
USP4-208ENST00000464168 OR10H3O60404 316 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 ECDO95905 644 aaPredicted RBP18.66■□□□□ 0.58
USP4-208ENST00000464168 SEMG1P04279 462 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 PSKH1P11801 424 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 ZNF823P16415 610 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 PYCR1P32322 319 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 GSSP48637 474 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 SPIBQ01892 262 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.66■□□□□ 0.58
USP4-208ENST00000464168 C11orf91Q3C1V1 193 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 DRAM2Q6UX65 266 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 PDZD9Q8IXQ8 264 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 PIP4P2Q8N4L2 257 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 ZNRF4Q8WWF5 429 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 NSRP1Q9H0G5 558 aaKnown RBP18.66■□□□□ 0.58
USP4-208ENST00000464168 CCDC134Q9H6E4 229 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 KAAG1Q9UBP8 84 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 V9GYQ6 96 aa18.66■□□□□ 0.58
USP4-208ENST00000464168 A6NLC8 198 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 TAF9Q16594 264 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 TEX36Q5VZQ5 186 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 SCCPDHQ8NBX0 429 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 OR56B2PQ8NGI1 322 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 PYURFQ96I23 114 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 CNTD2Q9H8S5 307 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 GORASP2Q9H8Y8 452 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 ADA2Q9NZK5 511 aa18.65■□□□□ 0.58
USP4-208ENST00000464168 RPUSD1Q9UJJ7 312 aaKnown RBP18.65■□□□□ 0.58
USP4-208ENST00000464168 IGHV3OR15-7A0A075B7D8 119 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 TVP23AA6NH52 213 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 BHLHE40O14503 412 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 CDONQ4KMG0 1287 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 LYPD4Q6UWN0 246 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 FGFRL1Q8N441 504 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 RNF148Q8N7C7 305 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 ZSCAN4Q8NAM6 433 aaPredicted RBP18.64■□□□□ 0.57
USP4-208ENST00000464168 CYB561A3Q8NBI2 242 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 UBE2FQ969M7 185 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 PKP2Q99959 881 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 SPAG4Q9NPE6 437 aa18.64■□□□□ 0.57
USP4-208ENST00000464168 hCG_1807616A0A1W2PRN6 198 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 SLC2A1P11166 492 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 PRKXP51817 358 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 ELF3P78545 371 aaPredicted RBP18.63■□□□□ 0.57
USP4-208ENST00000464168 TSPAN31Q12999 210 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 DCXRQ7Z4W1 244 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 VMO1Q7Z5L0 202 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 C11orf53Q8IXP5 236 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 LNX2Q8N448 690 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 PROKR2Q8NFJ6 384 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 ST8SIA4Q92187 359 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 DPAGT1Q9H3H5 408 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 TCF7L1Q9HCS4 588 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 C14orf119Q9NWQ9 140 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 KPTNQ9Y664 436 aa18.63■□□□□ 0.57
USP4-208ENST00000464168 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.62■□□□□ 0.57
USP4-208ENST00000464168 A0A1B0GW55 424 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 SLC22A31A6NKX4 558 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 GMNNO75496 209 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 DUX4L2P0CJ85 424 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 DUX4L3P0CJ86 424 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 DUX4L4P0CJ87 422 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 DUX4L5P0CJ88 424 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 DUX4L6P0CJ89 424 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 DUX4L7P0CJ90 424 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 IFNGR2P38484 337 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 MZT1Q08AG7 82 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 DUX4L9Q6RFH8 374 aaPredicted RBP18.62■□□□□ 0.57
USP4-208ENST00000464168 GDPGP1Q6ZNW5 385 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 Q6ZSV7 163 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 LY6G5BQ8NDX9 201 aa18.62■□□□□ 0.57
USP4-208ENST00000464168 OR51L1Q8NGJ5 315 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms