RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 HSF1Q00613 529 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 COL10A1Q03692 680 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 DHRS2Q13268 280 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PIN1Q13526 163 aaPredicted RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 GPNMBQ14956 572 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 TAF9Q16594 264 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 RNF219Q5W0B1 726 aaPredicted RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF770Q6IQ21 691 aaPredicted RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 LEG1Q6P5S2 330 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF880Q6PDB4 577 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 SPRED2Q7Z698 418 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 BIVMQ86UB2 503 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 MYPOPQ86VE0 399 aaPredicted RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM192Q8IY95 271 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PAQR4Q8N4S7 273 aaPredicted RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ZSCAN4Q8NAM6 433 aaPredicted RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 BHLHE23Q8NDY6 225 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OR4K14Q8NGD5 310 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 FAM3CQ92520 227 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 GHSRQ92847 366 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 MOAP1Q96BY2 351 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 CMBLQ96DG6 245 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 HPDLQ96IR7 371 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PSMG3-AS1Q96PY0 264 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 HIST1H2AAQ96QV6 131 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OR5B2Q96R09 309 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 MYADMQ96S97 322 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 RARRES2Q99969 163 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 NICN1Q9BSH3 213 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ABHD14AQ9BUJ0 271 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PLEKHA1Q9HB21 404 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 SLC17A5Q9NRA2 495 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PIGVQ9NUD9 493 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OR6C3Q9NZP0 311 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 CACNG4Q9UBN1 327 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 MRPS33Q9Y291 106 aaKnown RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 NME7Q9Y5B8 376 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 A0A1B0GV72 72 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 F8VVB4 439 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 F8VWA3 439 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 FAAHO00519 579 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 CTSVO60911 334 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 SAP30O75446 220 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 CD160O95971 181 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 CST4P01036 141 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 APODP05090 189 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 JMJD7P0C870 316 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF286BP0CG31 522 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ACP5P13686 325 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 HOXB9P17482 250 aaPredicted RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PSMB6P28072 239 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PYCR1P32322 319 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 SNCAP37840 140 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OPRD1P41143 372 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 VIPR2P41587 438 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 CRYBA4P53673 196 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PNLIPRP1P54315 467 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 IL2P60568 153 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 JAG1P78504 1218 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 MC1RQ01726 317 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 CHIT1Q13231 466 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 SRSF5Q13243 272 aaKnown RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 LASP1Q14847 261 aaKnown RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 EXT1Q16394 746 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 HIKESHIQ53FT3 197 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 LRRC73Q5JTD7 316 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 STPG1Q5TH74 334 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 FDX2Q6P4F2 183 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF66Q6ZN08 573 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 LHFPL2Q6ZUX7 228 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 MED25Q71SY5 747 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 TAS1R1Q7RTX1 841 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF101Q8IZC7 436 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM99Q8N816 258 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF709Q8N972 641 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 LMNTD1Q8N9Z9 388 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 NECAP1Q8NC96 275 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF485Q8NCK3 441 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 VN1R2Q8NFZ6 395 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OR4K5Q8NGD3 323 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OR10W1Q8NGF6 305 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OR4D6Q8NGJ1 314 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OR6N1Q8NGY5 312 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 OR4X1Q8NH49 305 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 STT3BQ8TCJ2 826 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 SLC7A13Q8TCU3 470 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM239Q8WW34 195 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM37Q8WXS4 190 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 FBXO32Q969P5 355 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 APH1AQ96BI3 265 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 C4orf36Q96KX1 117 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 FANCD2OSQ96PS1 177 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 SLC22A12Q96S37 553 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 PCYT2Q99447 389 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 TXN2Q99757 166 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 UTP23Q9BRU9 249 aaKnown RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 WRAP53Q9BUR4 548 aaKnown RBP3.22□□□□□ -1.89
COL8A1-205ENST00000463753 VAMP8Q9BV40 100 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 MFSD1Q9H3U5 465 aa3.22□□□□□ -1.89
COL8A1-205ENST00000463753 MED20Q9H944 212 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms