RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 MRPL15Q9P015 296 aaKnown RBP11.85□□□□□ -0.51
SMC1A-204ENST00000463684 TMEM5Q9Y2B1 443 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 MAB21L2Q9Y586 359 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 IER3IP1Q9Y5U9 82 aa11.85□□□□□ -0.51
SMC1A-204ENST00000463684 IFNW1P05000 195 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 GRK5P34947 590 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 CDKN2AP42771 156 aaKnown RBP11.84□□□□□ -0.51
SMC1A-204ENST00000463684 RPS6KA3P51812 740 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 UBE2E1P51965 193 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 ACSM1Q08AH1 577 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 KLRD1Q13241 179 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 SLC36A3Q495N2 470 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 CFAP77Q6ZQR2 320 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 PTCHD4Q6ZW05 846 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 TSEN54Q7Z6J9 526 aaKnown RBP11.84□□□□□ -0.51
SMC1A-204ENST00000463684 LINC00346Q8IVM7 164 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 FGFRL1Q8N441 504 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 BEND2Q8NDZ0 799 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 PHF21AQ96BD5 680 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 R3HDM4Q96D70 268 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 TSSK2Q96PF2 358 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 SSX3Q99909 188 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 RANBP3Q9H6Z4 567 aaPredicted RBP11.84□□□□□ -0.51
SMC1A-204ENST00000463684 SRA1Q9HD15 236 aaKnown RBP11.84□□□□□ -0.51
SMC1A-204ENST00000463684 SNX13Q9Y5W8 968 aa11.84□□□□□ -0.51
SMC1A-204ENST00000463684 PLXNB1O43157 2135 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 BHLHE40O14503 412 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 FFAR1O14842 300 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 PTP4A3O75365 173 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 PPP1R3DO95685 299 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 MPIG6BO95866 241 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 ZNF92Q03936 586 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 LY6EQ16553 131 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 LRRC10Q5BKY1 277 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 WDR38Q5JTN6 314 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 FOXB2Q5VYV0 432 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 NCR3LG1Q68D85 454 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 SLC18B1Q6NT16 456 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 PGBD2Q6P3X8 592 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 DPY19L2P2Q6ZN68 376 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 PNKDQ8N490 385 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 Q8N7P7 452 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 OR4F17Q8NGA8 305 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 OR51G2Q8NGK0 314 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 H1FXQ92522 213 aaKnown RBP11.83□□□□□ -0.52
SMC1A-204ENST00000463684 SPTSSAQ969W0 71 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 FAM46AQ96IP4 442 aaKnown RBP11.83□□□□□ -0.52
SMC1A-204ENST00000463684 OR4F4Q96R69 305 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 GPX7Q96SL4 187 aaPredicted RBP11.83□□□□□ -0.52
SMC1A-204ENST00000463684 DCTN5Q9BTE1 182 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 MMP28Q9H239 520 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 PRPF19Q9UMS4 504 aaKnown RBP11.83□□□□□ -0.52
SMC1A-204ENST00000463684 B9D1Q9UPM9 204 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 SIGLEC7Q9Y286 467 aa11.83□□□□□ -0.52
SMC1A-204ENST00000463684 A0A1B0GW55 424 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 M0R135 149 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DCTN6O00399 190 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 FBXO24O75426 580 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 NPPAP01160 153 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 HLA-DQA2P01906 255 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DUX4L2P0CJ85 424 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DUX4L3P0CJ86 424 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DUX4L4P0CJ87 422 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DUX4L5P0CJ88 424 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DUX4L6P0CJ89 424 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DUX4L7P0CJ90 424 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DLX1P56177 255 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 IKZF1Q13422 519 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 BLMHQ13867 455 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 PCK2Q16822 640 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
SMC1A-204ENST00000463684 LNX2Q8N448 690 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 SLC26A10Q8NG04 563 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 OR8S1Q8NH09 359 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 OR2AE1Q8NHA4 323 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 SLC7A13Q8TCU3 470 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 LRRC29Q8WV35 223 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 STON2Q8WXE9 905 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 TNFRSF14Q92956 283 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 ZNF799Q96GE5 643 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 NPFFR1Q9GZQ6 430 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 DUX4Q9UBX2 424 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 RAB21Q9UL25 225 aa11.82□□□□□ -0.52
SMC1A-204ENST00000463684 SF3B6Q9Y3B4 125 aaKnown RBP11.82□□□□□ -0.52
SMC1A-204ENST00000463684 IGLV1-36A0A0B4J1U3 117 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 TXNDC12O95881 172 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 RENP00797 406 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 TROVE2P10155 538 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMC1A-204ENST00000463684 NAA10P41227 235 aaPredicted RBP11.81□□□□□ -0.52
SMC1A-204ENST00000463684 ELF3P78545 371 aaPredicted RBP11.81□□□□□ -0.52
SMC1A-204ENST00000463684 RFX4Q33E94 735 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 SNAI3Q3KNW1 292 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 DEFB121Q5J5C9 76 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 DPY19L4Q7Z388 723 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 VTCN1Q7Z7D3 282 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 CYP4Z1Q86W10 505 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 NDUFA11Q86Y39 141 aa11.81□□□□□ -0.52
SMC1A-204ENST00000463684 OR6V1Q8N148 313 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms