RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 IRF2P14316 349 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 ANOS1P23352 680 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 CFL1P23528 166 aaKnown RBP13.66□□□□□ -0.22
COL1A1-202ENST00000463440 GATA3P23771 443 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 RBMXP38159 391 aaKnown RBP13.66□□□□□ -0.22
COL1A1-202ENST00000463440 DDOSTP39656 456 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 NAA10P41227 235 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-202ENST00000463440 ZNF121P58317 390 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-202ENST00000463440 MAB21L1Q13394 359 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 KDM4DQ6B0I6 523 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 FAM57BQ71RH2 274 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 OR56B2PQ8NGI1 322 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 OR11L1Q8NGX0 322 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 ADAT1Q9BUB4 502 aaKnown RBP13.66□□□□□ -0.22
COL1A1-202ENST00000463440 OR10A2Q9H208 303 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 PATZ1Q9HBE1 687 aaKnown RBP13.66□□□□□ -0.22
COL1A1-202ENST00000463440 G6PC2Q9NQR9 355 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 LAMP5Q9UJQ1 280 aa13.66□□□□□ -0.22
COL1A1-202ENST00000463440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-202ENST00000463440 J3QLI3 93 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 PHF1O43189 567 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-202ENST00000463440 MITFO75030 526 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-202ENST00000463440 FOXH1O75593 365 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 LCN2P80188 198 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 MZT1Q08AG7 82 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 DCAF12L2Q5VW00 463 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 SLC16A9Q7RTY1 509 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 KLBQ86Z14 1044 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 SPERTQ8NA61 448 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 TMEM158Q8WZ71 300 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 CENPNQ96H22 339 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-202ENST00000463440 REEP6Q96HR9 211 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 PGAM5Q96HS1 289 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 TEAD3Q99594 435 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 YIPF3Q9GZM5 350 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 NIPAL2Q9H841 368 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 BRD7Q9NPI1 651 aa13.65□□□□□ -0.22
COL1A1-202ENST00000463440 H2AFY2Q9P0M6 372 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-202ENST00000463440 ZAR1LA6NP61 321 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 ANKRD30BLA7E2S9 258 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 RNF212BA8MTL3 300 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 PRKYO43930 277 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 FSTL3O95633 263 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 CPT2P23786 658 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 FAM3AP98173 230 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 SCGB2A2Q13296 93 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 SLX4IPQ5VYV7 408 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 PRSS45Q7RTY3 260 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 KRT77Q7Z794 578 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 PLPP7Q8NBV4 271 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 Q8TCH9 128 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 SGK3Q96BR1 496 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 RGCCQ9H4X1 137 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 FN3KRPQ9HA64 309 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 METRNQ9UJH8 293 aa13.64□□□□□ -0.23
COL1A1-202ENST00000463440 PPIAL4EA0A075B759 164 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 CCDC182A6NF36 153 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 CEACAM18A8MTB9 384 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 F5H0A9 414 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-202ENST00000463440 PPIAL4DF5H284 164 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 PPIAL4FP0DN26 164 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 ALOX5APP20292 161 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 PMELP40967 661 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 SNCBQ16143 134 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 GFOD2Q3B7J2 385 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 ESCO2Q56NI9 601 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 PRAMEF6Q5VXH4 476 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 C12orf73Q69YU5 71 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 KCTD18Q6PI47 426 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-202ENST00000463440 LRRN1Q6UXK5 716 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 RFLNBQ8N5W9 214 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 TCEANCQ8N8B7 351 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 TMEM163Q8TC26 289 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 METTL17Q9H7H0 456 aaPredicted RBP13.63□□□□□ -0.23
COL1A1-202ENST00000463440 TMEM165Q9HC07 324 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 UFSP2Q9NUQ7 469 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 C14orf119Q9NWQ9 140 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 MIOXQ9UGB7 285 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 OAZ3Q9UMX2 235 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 KLHDC2Q9Y2U9 406 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 PPIAL4AQ9Y536 164 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 TMEM14AQ9Y6G1 99 aa13.63□□□□□ -0.23
COL1A1-202ENST00000463440 PPIAL4CA0A0B4J2A2 164 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 hCG_38984A0A1B0GV85 526 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 FAM20BO75063 409 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 ZNF205O95201 554 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 MRPL3P09001 348 aaKnown RBP13.62□□□□□ -0.23
COL1A1-202ENST00000463440 RPS2P15880 293 aaKnown RBP13.62□□□□□ -0.23
COL1A1-202ENST00000463440 ZFP36P26651 326 aaKnown RBP13.62□□□□□ -0.23
COL1A1-202ENST00000463440 EPHA2P29317 976 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 HCCSP53701 268 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 PSMA6P60900 246 aaKnown RBP13.62□□□□□ -0.23
COL1A1-202ENST00000463440 ACTR3P61158 418 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 MPPED2Q15777 294 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 LIPNQ5VXI9 398 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 NXNL2Q5VZ03 156 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 DEGS2Q6QHC5 323 aa13.62□□□□□ -0.23
COL1A1-202ENST00000463440 MEPCEQ7L2J0 689 aaKnown RBP13.62□□□□□ -0.23
COL1A1-202ENST00000463440 FTMTQ8N4E7 242 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms