RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 INSL4Q14641 139 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 PDK2Q15119 407 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 GUSBP1Q15486 140 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 FBXL19-AS1Q494R0 122 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 SPINK9Q5DT21 86 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 C1orf220Q5T0J3 134 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 OR52E8Q6IFG1 317 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 SPAG11AQ6PDA7 123 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 ZNF322Q6U7Q0 402 aaPredicted RBP-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 METAP1DQ6UB28 335 aaPredicted RBP-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 SBSNQ6UWP8 590 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 HRCT1Q6UXD1 115 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 FOXI2Q6ZQN5 318 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 ACOT1Q86TX2 421 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 MICU2Q8IYU8 434 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 OR2L13Q8N349 312 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 LINC00337Q8N6G1 96 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 LSMEM1Q8N8F7 131 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 ATP6V0D2Q8N8Y2 350 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 FDCSPQ8NFU4 85 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 RASSF5Q8WWW0 418 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 PTX4Q96A99 478 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 SMARCD1Q96GM5 515 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 OR2V2Q96R30 315 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 FAM103A1Q9BTL3 118 aaKnown RBP-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 RSG1Q9BU20 258 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 TIMM21Q9BVV7 248 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 BBS2Q9BXC9 721 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 UGT2B28Q9BY64 529 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 ZNF160Q9HCG1 818 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 CSNK1G1Q9HCP0 422 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 ZNF302Q9NR11 478 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 HOXC10Q9NYD6 342 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 SPASTQ9UBP0 616 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 FBXW2Q9UKT8 454 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 STX8Q9UNK0 236 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 SOX21Q9Y651 276 aaPredicted RBP-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 UBE4BO95155 1302 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 NCOA1Q15788 1441 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 ARHGAP31Q2M1Z3 1444 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 ATP10AO60312 1499 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 NKTRP30414 1462 aaKnown RBP-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 CICQ96RK0 1608 aaPredicted RBP-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 PIK3C2AO00443 1686 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 TJP1Q07157 1748 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 BCORL1Q5H9F3 1711 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 KIDINS220Q9ULH0 1771 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 TANC1Q9C0D5 1861 aa-0.75□□□□□ -2.53
TMEM56-204ENST00000463375 ATG2AQ2TAZ0 1938 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 IGHV3-72A0A0B4J1Y9 119 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 TRAV39A0A0B4J263 110 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 TRAV26-2A0A0B4J265 109 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 FAM236AA0A1B0GUQ0 79 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 LINC00959A0A1B0GUT2 108 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 FAM236BA0A1B0GV22 79 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 C20orf202A1L168 122 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 CCDC182A6NF36 153 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 UPK2O00526 184 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 CASC3O15234 703 aaKnown RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 LY6HO94772 140 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 RAB3DO95716 219 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 TGM6O95932 706 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 IGKV2D-40P01614 121 aaPredicted RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 C1QBP02746 253 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 THRAP10827 490 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 POLR2EP19388 210 aaKnown RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 PCMT1P22061 227 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 AK4P27144 223 aaPredicted RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 IL12BP29460 328 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 OPRM1P35372 400 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 CEACAM6P40199 344 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 GPR6P46095 362 aaPredicted RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 NPBWR2P48146 333 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 TGM4P49221 684 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 XKP51811 444 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 SUB1P53999 127 aaKnown RBP eCLIP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 RPS23P62266 143 aaKnown RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 ERVK-25P63136 954 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 QRFPP83859 136 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 SNX1Q13596 522 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 ZMYND11Q15326 602 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 TSC22D1Q15714 1073 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 DEFB110Q30KQ9 67 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 ORMDL2Q53FV1 153 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 MPV17L2Q567V2 206 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 FAM201AQ5SY85 155 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 CNIH2Q6PI25 160 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 CLPSL2Q6UWE3 100 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 TMEM179Q6ZVK1 233 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 PEX26Q7Z412 305 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 DAZ4Q86SG3 579 aaKnown RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 ZNF410Q86VK4 478 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 DOLPP1Q86YN1 238 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 CBWD2Q8IUF1 395 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 SYCP3Q8IZU3 236 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 STK40Q8N2I9 435 aa-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 GTPBP8Q8N3Z3 284 aaPredicted RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 ASCC1Q8N9N2 400 aaKnown RBP-0.76□□□□□ -2.53
TMEM56-204ENST00000463375 LFNGQ8NES3 379 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms