RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ADAM20	O43506	726 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR10H3	O60404	316 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ATP5H	O75947	161 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	IRF2	P14316	349 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	NCK1	P16333	377 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	RPS6KA3	P51812	740 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	MNAT1	P51948	309 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	SLC7A2	P52569	658 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ECH1	Q13011	328 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	RFX4	Q33E94	735 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	DNM1P34	Q6PK57	102 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZNF826P	Q6ZT77	177 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	CCDC121	Q6ZUS5	278 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	PGAP1	Q75T13	922 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	WDR86	Q86TI4	376 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	C1QL4	Q86Z23	238 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	C11orf53	Q8IXP5	236 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR2AE1	Q8NHA4	323 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZNRF4	Q8WWF5	429 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	LHX4	Q969G2	390 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ERMAP	Q96PL5	475 aa	Predicted RBP	9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ADAT1	Q9BUB4	502 aa	Known RBP	9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	TRIM15	Q9C019	465 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	NDEL1	Q9GZM8	345 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	C1orf21	Q9H246	121 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR52D1	Q9H346	318 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	MMADHC	Q9H3L0	296 aa	Predicted RBP	9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	FN3K	Q9H479	309 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	FN3KRP	Q9HA64	309 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	SRA1	Q9HD15	236 aa	Known RBP	9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ADA2	Q9NZK5	511 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ERVK-18	Q9QC07	812 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	ABCD2	Q9UBJ2	740 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	COL7A1	Q02388	2944 aa		9.19	□□□□□ -0.94
PTPN7-204	ENST00000462815	MEGF11	A6BM72	1044 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815		M0R135	149 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	DVL1	O14640	695 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	GMDS	O60547	372 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	TSPAN9	O75954	239 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	DIRAS1	O95057	198 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	GYPA	P02724	150 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	LCAT	P04180	440 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	RHCE	P18577	417 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	AMY2B	P19961	511 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	RPS27	P42677	84 aa	Known RBP	9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	NUDT2	P50583	147 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	ARF6	P62330	175 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR8G1	Q15617	311 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	C11orf91	Q3C1V1	193 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	FGD3	Q5JSP0	725 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	GLYATL3	Q5SZD4	288 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	METTL11B	Q5VVY1	283 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	METAP1D	Q6UB28	335 aa	Predicted RBP	9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	FKBP9P1	Q75LS8	142 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	BTN2A1	Q7KYR7	527 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	ASRGL1	Q7L266	308 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	CYP4Z1	Q86W10	505 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	PNLDC1	Q8NA58	520 aa	Known RBP	9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	TBC1D15	Q8TC07	691 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	FANK1	Q8TC84	345 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	UBE2F	Q969M7	185 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZNF799	Q96GE5	643 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	PITX2	Q99697	317 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	SLC22A4	Q9H015	551 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	SEMA6A	Q9H2E6	1030 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	RPRD1B	Q9NQG5	326 aa	Known RBP	9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	MRPL15	Q9P015	296 aa	Known RBP	9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	ZNRD1	Q9P1U0	126 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	RPUSD1	Q9UJJ7	312 aa	Known RBP	9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	NBEAL2	Q6ZNJ1	2754 aa		9.18	□□□□□ -0.94
PTPN7-204	ENST00000462815	TRAV38-1	A0A0B4J264	116 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	NDUFA2	O43678	99 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	GSS	P48637	474 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	CENPA	P49450	140 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	PSME3	P61289	254 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	MALL	Q13021	153 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	KCNJ8	Q15842	424 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	PCK2	Q16822	640 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	CDON	Q4KMG0	1287 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	KPRP	Q5T749	579 aa	Predicted RBP	9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	LYPD4	Q6UWN0	246 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	RRM2B	Q7LG56	351 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	MRPL21	Q7Z2W9	205 aa	Known RBP	9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	VMO1	Q7Z5L0	202 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	PDZD9	Q8IXQ8	264 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	PGAM4	Q8N0Y7	254 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815		Q8N7P7	452 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	SDR9C7	Q8NEX9	313 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	OR4K13	Q8NH42	304 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	SPRYD4	Q8WW59	207 aa	Predicted RBP	9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	TNFRSF14	Q92956	283 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	SPSB4	Q96A44	273 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	HOPX	Q9BPY8	73 aa	Predicted RBP	9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	BTBD10	Q9BSF8	475 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	DCAF13	Q9NV06	445 aa	Known RBP	9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	C1orf123	Q9NWV4	160 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	KPTN	Q9Y664	436 aa		9.17	□□□□□ -0.94
PTPN7-204	ENST00000462815	IGHV3OR15-7	A0A075B7D8	119 aa		9.16	□□□□□ -0.94
PTPN7-204	ENST00000462815	RNASEK-C17orf49	H0YIS7	233 aa		9.16	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms