RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 NXPH3O95157 252 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 CFDP00746 253 aaPredicted RBP14.27□□□□□ -0.12
SMC4-204ENST00000462787 OR4D11Q8NGI4 311 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 ACTR3CQ9C0K3 210 aaPredicted RBP14.27□□□□□ -0.12
SMC4-204ENST00000462787 GPR84Q9NQS5 396 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 PRDM7Q9NQW5 492 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 ING1Q9UK53 422 aaPredicted RBP14.27□□□□□ -0.12
SMC4-204ENST00000462787 TRBV11-1A0A0K0K1C0 115 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 MPTX1A8MV57 137 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 PTGFRP43088 359 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 PKIAP61925 76 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 ZNF90Q03938 601 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 THSD4Q6ZMP0 1018 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 TNFSF18Q9UNG2 199 aa14.27□□□□□ -0.12
SMC4-204ENST00000462787 M0R143 59 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 NHLRC3Q5JS37 347 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 CD200R1LQ6Q8B3 271 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 ZNF66Q6ZN08 573 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 GLI4P10075 376 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 CD79AP11912 226 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 ABOP16442 354 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 RPL7L1Q6DKI1 246 aaKnown RBP14.27□□□□□ -0.13
SMC4-204ENST00000462787 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.13
SMC4-204ENST00000462787 NXPE3Q969Y0 559 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 UCK1Q9HA47 277 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 FBXL17Q9UF56 701 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 NEU3Q9UQ49 428 aa14.27□□□□□ -0.13
SMC4-204ENST00000462787 FAM74A7A6NL05 159 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 RBP2P50120 134 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 UBE2NP61088 152 aaKnown RBP14.26□□□□□ -0.13
SMC4-204ENST00000462787 ELAVL1Q15717 326 aaKnown RBP14.26□□□□□ -0.13
SMC4-204ENST00000462787 FAM74A3Q4VXF1 159 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 KIAA0895LQ68EN5 471 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 OR8G2PQ6IF36 304 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 SPACA5Q96QH8 159 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 MRPL22Q9NWU5 206 aaKnown RBP14.26□□□□□ -0.13
SMC4-204ENST00000462787 ABCA3Q99758 1704 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 PRAMEF4O60810 478 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 THEM4Q5T1C6 240 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 ZNF660Q6AZW8 331 aaPredicted RBP14.26□□□□□ -0.13
SMC4-204ENST00000462787 ADIPOR2Q86V24 386 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 KLF15Q9UIH9 416 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 ACAD8Q9UKU7 415 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 PLSCR5A0PG75 271 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 VSTM5A8MXK1 200 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 F6UZH7 168 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 MSX1P28360 303 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 PPICP45877 212 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 CA13Q8N1Q1 262 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 ZNF383Q8NA42 475 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 NT5CQ8TCD5 201 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 OR51M1Q9H341 326 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 EIF1BO60739 113 aaKnown RBP14.26□□□□□ -0.13
SMC4-204ENST00000462787 EIF1P41567 113 aaKnown RBP14.26□□□□□ -0.13
SMC4-204ENST00000462787 NAAAQ02083 359 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 SLC25A42Q86VD7 318 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 OR11H4Q8NGC9 324 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 PIK3IP1Q96FE7 263 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 NUMA1Q14980 2115 aa14.26□□□□□ -0.13
SMC4-204ENST00000462787 APOA2P02652 100 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 RUNX2Q13950 521 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 TMEM164Q5U3C3 297 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 MRPL43Q8N983 215 aaKnown RBP14.25□□□□□ -0.13
SMC4-204ENST00000462787 ZG16BQ96DA0 208 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 THAP10Q9P2Z0 257 aaPredicted RBP14.25□□□□□ -0.13
SMC4-204ENST00000462787 DTYMKP23919 212 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 ZNF770Q6IQ21 691 aaPredicted RBP14.25□□□□□ -0.13
SMC4-204ENST00000462787 PUSL1Q8N0Z8 303 aaKnown RBP14.25□□□□□ -0.13
SMC4-204ENST00000462787 PARD6AQ9NPB6 346 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 LYRM2Q9NU23 88 aaPredicted RBP14.25□□□□□ -0.13
SMC4-204ENST00000462787 CA14Q9ULX7 337 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 LRP12Q9Y561 859 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 TUSC2O75896 110 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 PRTGQ2VWP7 1150 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 ISOC2Q96AB3 205 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 MAP3K3Q99759 626 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 VAMP8Q9BV40 100 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 HIPK2Q9H2X6 1198 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 ZNF331Q9NQX6 463 aaPredicted RBP14.25□□□□□ -0.13
SMC4-204ENST00000462787 PARP11Q9NR21 331 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 ZNF320A2RRD8 509 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 SULT1A1P50225 295 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 HIST1H3AP68431 136 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 ZNF793Q6ZN11 406 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 NUBPLQ8TB37 319 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 ZNF845Q96IR2 970 aaPredicted RBP14.25□□□□□ -0.13
SMC4-204ENST00000462787 MBNL1Q9NR56 388 aaKnown RBP14.25□□□□□ -0.13
SMC4-204ENST00000462787 MYOTQ9UBF9 498 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 LAMB2P55268 1798 aa14.25□□□□□ -0.13
SMC4-204ENST00000462787 ARG1P05089 322 aa14.24□□□□□ -0.13
SMC4-204ENST00000462787 VAMP3Q15836 100 aa14.24□□□□□ -0.13
SMC4-204ENST00000462787 IL23AQ9NPF7 189 aa14.24□□□□□ -0.13
SMC4-204ENST00000462787 IDSB3KWA1 339 aa14.24□□□□□ -0.13
SMC4-204ENST00000462787 ABHD16AO95870 558 aa14.24□□□□□ -0.13
SMC4-204ENST00000462787 FGF2P09038 288 aa14.24□□□□□ -0.13
SMC4-204ENST00000462787 MGST1P10620 155 aaKnown RBP14.24□□□□□ -0.13
SMC4-204ENST00000462787 OPRM1P35372 400 aa14.24□□□□□ -0.13
SMC4-204ENST00000462787 PNRC1Q12796 327 aaPredicted RBP14.24□□□□□ -0.13
SMC4-204ENST00000462787 ECH1Q13011 328 aa14.24□□□□□ -0.13
SMC4-204ENST00000462787 FAM3CQ92520 227 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms