RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TMEM38BQ9NVV0 291 aa12.72□□□□□ -0.37
HDAC6-213ENST00000462730 CGGBP1Q9UFW8 167 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-213ENST00000462730 MCTS1Q9ULC4 181 aaKnown RBP12.72□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF407Q9C0G0 2248 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 IGKV3D-15A0A087WSY6 115 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 TRAV17A0A0B4J275 112 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 MEGF11A6BM72 1044 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 TUBAL3A6NHL2 446 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 BET1O15155 118 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 CTDSPLO15194 276 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 GSTZ1O43708 216 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-213ENST00000462730 CDK2P24941 298 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 POU3F4P49335 361 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 TAGLNQ01995 201 aaKnown RBP12.71□□□□□ -0.37
HDAC6-213ENST00000462730 BAMBIQ13145 260 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 C3AR1Q16581 482 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 GFOD2Q3B7J2 385 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 ELFN2Q5R3F8 820 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 TMEM69Q5SWH9 247 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 FAM27BQ5VT28 67 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 FAM166AQ6J272 317 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 MTFR2Q6P444 385 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 ABHD12BQ7Z5M8 362 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF431Q8TF32 576 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-213ENST00000462730 FAM3DQ96BQ1 224 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 ADAT3Q96EY9 351 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-213ENST00000462730 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 EXO5Q9H790 373 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 AUNIPQ9H7T9 357 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 GPR35Q9HC97 309 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 GPR84Q9NQS5 396 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF319Q9P2F9 582 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 ZNF222Q9UK12 451 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 MGAT4AQ9UM21 535 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 NOSIPQ9Y314 301 aaKnown RBP12.71□□□□□ -0.37
HDAC6-213ENST00000462730 NUBP2Q9Y5Y2 271 aa12.71□□□□□ -0.37
HDAC6-213ENST00000462730 TNRC6AQ8NDV7 1962 aaKnown RBP12.71□□□□□ -0.38
HDAC6-213ENST00000462730 LEUTXA8MZ59 168 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 CST2P09228 141 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 TMIGD3P0DMS9 266 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-213ENST00000462730 ANXA3P12429 323 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 B4GALT1P15291 398 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF20P17024 532 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 CTSSP25774 331 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 PER3P56645 1201 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 CEACAM16Q2WEN9 425 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 CD276Q5ZPR3 534 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 JAGN1Q8N5M9 183 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 SMIM4Q8WVI0 70 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 PGAM5Q96HS1 289 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 FAM71F1Q96KD3 344 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-213ENST00000462730 PRRG4Q9BZD6 226 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 PLEK2Q9NYT0 353 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 EMC3Q9P0I2 261 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 EIF3KQ9UBQ5 218 aaKnown RBP12.7□□□□□ -0.38
HDAC6-213ENST00000462730 ELF5Q9UKW6 265 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-213ENST00000462730 TRGV5A0A0B4J1U4 118 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 LOC100289279A0A1B0GTE1 492 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 F5H5K5 113 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 ACTL6AO96019 429 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 TCRBP04435 133 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 HTR2CP28335 458 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 SLC6A9P48067 706 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 PTH2RP49190 550 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 EFNB2P52799 333 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 C2orf76Q3KRA6 126 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 GLYATL3Q5SZD4 288 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 RIPPLY2Q5TAB7 128 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 TEX261Q6UWH6 196 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 TOMM5Q8N4H5 51 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 NKAIN3Q8N8D7 197 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 OR1M1Q8NGA1 313 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 OR6M1Q8NGM8 313 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 FNDC9Q8TBE3 224 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 GCDHQ92947 438 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-213ENST00000462730 SLC25A28Q96A46 364 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 RADILQ96JH8 1075 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 FOXB1Q99853 325 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 SOX7Q9BT81 388 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 OR51J1Q9H342 316 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 SPEF1Q9Y4P9 236 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 U3KQ87 197 aa12.7□□□□□ -0.38
HDAC6-213ENST00000462730 NCOA6Q14686 2063 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-213ENST00000462730 DNAJC13O75165 2243 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 TMEM272A0A1B0GTI8 110 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 MRPL33O75394 65 aaKnown RBP12.69□□□□□ -0.38
HDAC6-213ENST00000462730 KRT33AO76009 404 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 BDKRB2P30411 391 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 TAS2R20P59543 309 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 RAB35Q15286 201 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 SLCO5A1Q9H2Y9 848 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 SPRR3Q9UBC9 169 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 MSRB2Q9Y3D2 182 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 C5orf63A6NC05 138 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 SGCEO43556 437 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 SULT1B1O43704 296 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 SLC22A5O76082 557 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 IGHV3-9P01782 118 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 DBHP09172 617 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 CD37P11049 281 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms