RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PLEKHA8Q96JA3 519 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 MRI1Q9BV20 369 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 SSBP3Q9BWW4 388 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 TOR3AQ9H497 397 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 OPA3Q9H6K4 179 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 MARCH7Q9H992 704 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 CMC2Q9NRP2 79 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 TBC1D23Q9NUY8 699 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 MRPL15Q9P015 296 aaKnown RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 RNF7Q9UBF6 113 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF69Q9UC07 566 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 IGHV2-70DA0A0C4DH43 119 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 C5orf63A6NC05 138 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 GGT3PA6NGU5 568 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 AQP12BA6NM10 295 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 CLDN34H7C241 214 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 XRCC2O43543 280 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 NDUFA2O43678 99 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 FAM20BO75063 409 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 RGS9O75916 674 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-207ENST00000461798 SPARCP09486 303 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 CA6P23280 308 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 ANOS1P23352 680 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 SLC15A1P46059 708 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 GNB2P62879 340 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 ACTG1P63261 375 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 OR8G1Q15617 311 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 MPPED2Q15777 294 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 ARMCX4Q5H9R4 360 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 FAM201AQ5SY85 155 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 GLYATL3Q5SZD4 288 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 WDR25Q64LD2 544 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-207ENST00000461798 BTNL3Q6UXE8 466 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 RBMS3Q6XE24 437 aaKnown RBP7.64□□□□□ -1.19
BRCA1-207ENST00000461798 NLRC3Q7RTR2 1065 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 PRSS45Q7RTY3 260 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 AQP12AQ8IXF9 295 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 ADGRG5Q8IZF4 528 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 SIGLECL1Q8N7X8 197 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 OR10G2Q8NGC3 310 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 OR8B3Q8NGG8 313 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 GIPC3Q8TF64 312 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 OR8B2Q96RD0 313 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 FEVQ99581 238 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 NIPSNAP1Q9BPW8 284 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 CHID1Q9BWS9 393 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 SP140LQ9H930 580 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 ZMAT3Q9HA38 289 aaKnown RBP7.64□□□□□ -1.19
BRCA1-207ENST00000461798 FN3KRPQ9HA64 309 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 ARMC1Q9NVT9 282 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 U3KQV3 271 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 TENM1Q9UKZ4 2725 aa7.64□□□□□ -1.19
BRCA1-207ENST00000461798 IGHV3-64DA0A0J9YX35 117 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 DHRS12A0PJE2 317 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 RIIAD1A6NNX1 92 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 ZNF878C9JN71 531 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 LGALS8O00214 317 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 PHYHO14832 338 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 GLCEO94923 617 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 SOX14O95416 240 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 PLATP00750 562 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 LHBP01229 141 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 APOC1P02654 83 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 GYPBP06028 91 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 HKR1P10072 659 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 CLUP10909 449 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 ZNF3P17036 446 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 PRTN3P24158 256 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 GRK5P34947 590 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 PITPNBP48739 271 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 NPY4RP50391 375 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 PRKXP51817 358 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 BPIFB3P59826 476 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 GRB2P62993 217 aaKnown RBP7.63□□□□□ -1.19
BRCA1-207ENST00000461798 MZT1Q08AG7 82 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 TAF13Q15543 124 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 KCNJ8Q15842 424 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 C11orf91Q3C1V1 193 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 PRAMEF6Q5VXH4 476 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 LYPD2Q6UXB3 125 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 SHFQ7M4L6 423 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 DPY19L4Q7Z388 723 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 TIGD4Q8IY51 512 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 BCL6BQ8N143 479 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-207ENST00000461798 OR2AE1Q8NHA4 323 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 RNF133Q8WVZ7 376 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 C22orf15Q8WYQ4 148 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 SGK3Q96BR1 496 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 ZNF48Q96MX3 618 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-207ENST00000461798 COPS4Q9BT78 406 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 ABHD6Q9BV23 337 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 PRDM13Q9H4Q3 707 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 TRIM36Q9NQ86 728 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 CENPMQ9NSP4 180 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 CLN8Q9UBY8 286 aa7.63□□□□□ -1.19
BRCA1-207ENST00000461798 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-207ENST00000461798 CST1P01037 141 aa7.62□□□□□ -1.19
BRCA1-207ENST00000461798 LIPFP07098 398 aa7.62□□□□□ -1.19
BRCA1-207ENST00000461798 IGHV4-38-2P0DP08 117 aa7.62□□□□□ -1.19
BRCA1-207ENST00000461798 CFL1P23528 166 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms