RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SPIN2AQ99865 258 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 SPIN2BQ9BPZ2 258 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF430Q9H8G1 570 aaPredicted RBP1.88□□□□□ -2.11
HDAC6-212ENST00000461608 RRAGDQ9NQL2 400 aaPredicted RBP1.88□□□□□ -2.11
HDAC6-212ENST00000461608 TREX1Q9NSU2 369 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 ADA2Q9NZK5 511 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 ENOPH1Q9UHY7 261 aa1.88□□□□□ -2.11
HDAC6-212ENST00000461608 YTHDF2Q9Y5A9 579 aaKnown RBP1.88□□□□□ -2.11
HDAC6-212ENST00000461608 AQRO60306 1485 aaKnown RBP eCLIP1.88□□□□□ -2.112e-19■□□□□ 8.8
HDAC6-212ENST00000461608 ARPC4-TTLL3A0A0A6YYG9 625 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 CENPVL3A0A0U1RRI6 287 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 GSTTP1A0A1W2PQM5 241 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF99A8MXY4 864 aaPredicted RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 HACD1B0YJ81 288 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 TNFRSF11BO00300 401 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 SPOPO43791 374 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 EIF1BO60739 113 aaKnown RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 REM1O75628 298 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 SCELO95171 688 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 WISP3O95389 354 aaPredicted RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 ETHE1O95571 254 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 PAHP00439 452 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 MBP02144 154 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 CATP04040 527 aaKnown RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 CD74P04233 296 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 MRPL3P09001 348 aaKnown RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 STAG3L2P0CL84 134 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 NUP62P37198 522 aaPredicted RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 EIF1P41567 113 aaKnown RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 GFERP55789 205 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 PNOCQ13519 176 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 DGCR6Q14129 220 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 RCAN2Q14206 197 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 GABRA6Q16445 453 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 MPV17L2Q567V2 206 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 PRMT9Q6P2P2 845 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 C12orf54Q6X4T0 127 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 NDUFAF7Q7L592 441 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 SLC16A13Q7RTY0 426 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 OR2W3Q7Z3T1 314 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 OR10Z1Q8NGY1 313 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 FAM131CQ96AQ9 280 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 SCGB3A2Q96PL1 93 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF317Q96PQ6 595 aaPredicted RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 TMEM175Q9BSA9 504 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 PLA2G2FQ9BZM2 168 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 SLIRPQ9GZT3 109 aaKnown RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 ARMC7Q9H6L4 198 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 C12orf10Q9HB07 376 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 EXOSC4Q9NPD3 245 aaKnown RBP1.87□□□□□ -2.11
HDAC6-212ENST00000461608 SLC17A7Q9P2U7 560 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 OR51B2Q9Y5P1 312 aa1.87□□□□□ -2.11
HDAC6-212ENST00000461608 CAMTA1Q9Y6Y1 1673 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 IGHV7-4-1A0A0J9YVY3 117 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 KRBOX1C9JBD0 128 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 ANKRD63C9JTQ0 380 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 E7EWF7 191 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 KDELR3O43731 214 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 SLC19A2O60779 497 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 CTNSO60931 367 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 GATBO75879 557 aaKnown RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 TTC4O95801 387 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 GCGP01275 180 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 HLA-DQA1P01909 254 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 IL1RNP18510 177 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 IVDP26440 423 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 ARL2P36404 184 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 CXCL12P48061 93 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 CARD18P57730 90 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 TAS2R46P59540 309 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 TAS2R60P59551 318 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 RPL23P62829 140 aaKnown RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 C2orf54Q08AI8 447 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 TRDNQ13061 729 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 NAB1Q13506 487 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 PTGES3Q15185 160 aaKnown RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 HNRNPA1L2Q32P51 320 aaKnown RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 GCSAMLQ5JQS6 135 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF691Q5VV52 312 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 THOC7Q6I9Y2 204 aaKnown RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 OR2T5Q6IEZ7 315 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 DNAJC24Q6P3W2 148 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 LINC00336Q6ZUF6 198 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 WDFY1Q8IWB7 410 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 FAM58AQ8N1B3 248 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 ARHGAP18Q8N392 663 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 FBXO36Q8NEA4 188 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 OR4K5Q8NGD3 323 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 OR5AR1Q8NGP9 310 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 OR1J4Q8NGS1 313 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 OR6N1Q8NGY5 312 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 OR2T29Q8NH02 315 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 C17orf50Q8WW18 174 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF75CPQ92670 426 aaPredicted RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 RERGQ96A58 199 aaPredicted RBP1.86□□□□□ -2.11
HDAC6-212ENST00000461608 ZNF488Q96MN9 340 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 RDH12Q96NR8 316 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 TBL1YQ9BQ87 522 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 CHCHD7Q9BUK0 85 aa1.86□□□□□ -2.11
HDAC6-212ENST00000461608 SAMD10Q9BYL1 202 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms