RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 CALN1Q9BXU9 219 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 SLC7A5P2Q9GIP4 190 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 IL22Q9GZX6 179 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 PIGUQ9H490 435 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 SAV1Q9H4B6 383 aaPredicted RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 TMEM38AQ9H6F2 299 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 SYNDIG1Q9H7V2 258 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 RETNQ9HD89 108 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 TMEM9BQ9NQ34 198 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 CHRAC1Q9NRG0 131 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 PTTG3PQ9NZH4 202 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 MYEF2Q9P2K5 600 aaKnown RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 TAF1LQ8IZX4 1826 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 TUBGCP6Q96RT7 1819 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 BCL9O00512 1426 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 LRP4O75096 1905 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 A0A1B0GW55 424 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 TMEM120BA0PK00 339 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 TSPAN11A1L157 253 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 H0YC42 278 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 SNAI2O43623 268 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 RP2O75695 350 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 FLOT1O75955 427 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 IFNW1P05000 195 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 BCHEP06276 602 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 CLTAP09496 248 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 DUX4L2P0CJ85 424 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 DUX4L3P0CJ86 424 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 DUX4L5P0CJ88 424 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 DUX4L6P0CJ89 424 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 DUX4L7P0CJ90 424 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 PRPS2P11908 318 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 PSMC3P17980 439 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 ATF6P18850 670 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 MAGP20916 626 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 P2RX1P51575 399 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 SYNJ2BPP57105 145 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 DAOAP59103 153 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 PPP1CBP62140 327 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 RAP1AP62834 184 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 C16orf72Q14CZ0 275 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 AVPI1Q5T686 147 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 TTC19Q6DKK2 380 aaPredicted RBP2.41□□□□□ -2.02
CLK1-206ENST00000461326 FBXW12Q6X9E4 464 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 MRPL55Q7Z7F7 128 aaKnown RBP2.41□□□□□ -2.02
CLK1-206ENST00000461326 CBLN2Q8IUK8 224 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 SLC34A3Q8N130 599 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 CBR4Q8N4T8 237 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 UBE2ZQ9H832 354 aaPredicted RBP2.41□□□□□ -2.02
CLK1-206ENST00000461326 MRM3Q9HC36 420 aaKnown RBP2.41□□□□□ -2.02
CLK1-206ENST00000461326 HMG20AQ9NP66 347 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 MYOZ2Q9NPC6 264 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 ZC4H2Q9NQZ6 224 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 DUX4Q9UBX2 424 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 ZNF223Q9UK11 482 aaPredicted RBP2.41□□□□□ -2.02
CLK1-206ENST00000461326 KLK12Q9UKR0 248 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 C4BP0C0L5 1744 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 PAPPAQ13219 1627 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 NACAE9PAV3 2078 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 DENND4AQ7Z401 1863 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 KDM6AO15550 1401 aaPredicted RBP2.41□□□□□ -2.02
CLK1-206ENST00000461326 SIPA1L3O60292 1781 aaPredicted RBP2.41□□□□□ -2.02
CLK1-206ENST00000461326 CASZ1Q86V15 1759 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 MROH7-TTC4A0A0A0MT08 1334 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 GAKO14976 1311 aa2.41□□□□□ -2.02
CLK1-206ENST00000461326 COL5A3P25940 1745 aaPredicted RBP2.4□□□□□ -2.02
CLK1-206ENST00000461326 TJP1Q07157 1748 aa2.4□□□□□ -2.02
CLK1-206ENST00000461326 QSER1Q2KHR3 1735 aa2.4□□□□□ -2.02
CLK1-206ENST00000461326 PALLDQ8WX93 1383 aa2.4□□□□□ -2.02
CLK1-206ENST00000461326 MAP3K5Q99683 1374 aa2.4□□□□□ -2.02
CLK1-206ENST00000461326 IGKV6D-21A0A0A0MT36 114 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 IGLV1-36A0A0B4J1U3 117 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 PDZK1P1A8MUH7 402 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 C11orf94C9JXX5 98 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 BCKDKO14874 412 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 MAGEB4O15481 346 aaPredicted RBP2.4□□□□□ -2.03
CLK1-206ENST00000461326 XRCC2O43543 280 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 MED6O75586 246 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 CD160O95971 181 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 CD3GP09693 182 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 GFAPP14136 432 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 PRKACAP17612 351 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 MSR1P21757 451 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 CD82P27701 267 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 HCAR3P49019 387 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 RND2P52198 227 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 ZNF121P58317 390 aaPredicted RBP2.4□□□□□ -2.03
CLK1-206ENST00000461326 SEMG2Q02383 582 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 SLC39A6Q13433 755 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 ART3Q13508 389 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 KIR2DS1Q14954 304 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 DEFB116Q30KQ4 102 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 TRMT5Q32P41 509 aaKnown RBP2.4□□□□□ -2.03
CLK1-206ENST00000461326 ORMDL2Q53FV1 153 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 METTL21CQ5VZV1 264 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 H3F3CQ6NXT2 135 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 TIFABQ6ZNK6 161 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 METTL13Q8N6R0 699 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 NPWQ8N729 165 aa2.4□□□□□ -2.03
CLK1-206ENST00000461326 FAM86B1Q8N7N1 296 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms