RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 ENOPH1Q9UHY7 261 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 METRNQ9UJH8 293 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 CUBNO60494 3623 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 COL6A5A8TX70 2615 aa19.34■□□□□ 0.69
PTPN4-208ENST00000460289 MXRA5Q9NR99 2828 aa19.33■□□□□ 0.69
PTPN4-208ENST00000460289 IGHV3-64DA0A0J9YX35 117 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 C5orf63A6NC05 138 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 SELENOFO60613 162 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 FSTL3O95633 263 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 SLC2A5P22732 501 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 CFL1P23528 166 aaKnown RBP19.33■□□□□ 0.68
PTPN4-208ENST00000460289 RBMXP38159 391 aaKnown RBP19.33■□□□□ 0.68
PTPN4-208ENST00000460289 MZT1Q08AG7 82 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 SCGB2A2Q13296 93 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 TIGD6Q17RP2 521 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 DCAF12L2Q5VW00 463 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 PLPP7Q8NBV4 271 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 BBS1Q8NFJ9 593 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 OR11L1Q8NGX0 322 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 Q8TCH9 128 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 TEAD3Q99594 435 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 OR10A2Q9H208 303 aa19.33■□□□□ 0.68
PTPN4-208ENST00000460289 PPIAL4EA0A075B759 164 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 PPIAL4CA0A0B4J2A2 164 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 PPIAL4DF5H284 164 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 CYB5R3P00387 301 aaPredicted RBP19.32■□□□□ 0.68
PTPN4-208ENST00000460289 PPIAL4FP0DN26 164 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 ANOS1P23352 680 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 NAA10P41227 235 aaPredicted RBP19.32■□□□□ 0.68
PTPN4-208ENST00000460289 ZNF121P58317 390 aaPredicted RBP19.32■□□□□ 0.68
PTPN4-208ENST00000460289 LCN2P80188 198 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 APOFQ13790 326 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 KDM4DQ6B0I6 523 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 CCDC121Q6ZUS5 278 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 FAM57BQ71RH2 274 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 ASRGL1Q7L266 308 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 PRSS45Q7RTY3 260 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 AMIGO2Q86SJ2 522 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 RFLNBQ8N5W9 214 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 SPATA3Q8NHX4 192 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 LRTOMTQ8WZ04 291 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 SGK3Q96BR1 496 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 REEP6Q96HR9 211 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 ADAT1Q9BUB4 502 aaKnown RBP19.32■□□□□ 0.68
PTPN4-208ENST00000460289 GABARAPL1Q9H0R8 117 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 RGCCQ9H4X1 137 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 NIPAL2Q9H841 368 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 TMEM165Q9HC07 324 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 DNAJC27Q9NZQ0 273 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 LAMP5Q9UJQ1 280 aa19.32■□□□□ 0.68
PTPN4-208ENST00000460289 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.31■□□□□ 0.68
PTPN4-208ENST00000460289 ANKRD30BLA7E2S9 258 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 PMELP40967 661 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 LCN1P1Q5VSP4 162 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 LIPNQ5VXI9 398 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 SLC16A9Q7RTY1 509 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 OR56B2PQ8NGI1 322 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 CENPNQ96H22 339 aaPredicted RBP19.31■□□□□ 0.68
PTPN4-208ENST00000460289 YIPF3Q9GZM5 350 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 METTL17Q9H7H0 456 aaPredicted RBP19.31■□□□□ 0.68
PTPN4-208ENST00000460289 FN3KRPQ9HA64 309 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 H2AFY2Q9P0M6 372 aaPredicted RBP19.31■□□□□ 0.68
PTPN4-208ENST00000460289 PPIAL4AQ9Y536 164 aa19.31■□□□□ 0.68
PTPN4-208ENST00000460289 MITFO75030 526 aaPredicted RBP19.3■□□□□ 0.68
PTPN4-208ENST00000460289 ALOX5APP20292 161 aa19.3■□□□□ 0.68
PTPN4-208ENST00000460289 ZFP36P26651 326 aaKnown RBP19.3■□□□□ 0.68
PTPN4-208ENST00000460289 FAM3AP98173 230 aa19.3■□□□□ 0.68
PTPN4-208ENST00000460289 KCTD18Q6PI47 426 aaPredicted RBP19.3■□□□□ 0.68
PTPN4-208ENST00000460289 PGAM5Q96HS1 289 aa19.3■□□□□ 0.68
PTPN4-208ENST00000460289 TMPRSS13Q9BYE2 586 aa19.3■□□□□ 0.68
PTPN4-208ENST00000460289 BRD7Q9NPI1 651 aa19.3■□□□□ 0.68
PTPN4-208ENST00000460289 C14orf119Q9NWQ9 140 aa19.3■□□□□ 0.68
PTPN4-208ENST00000460289 MIOXQ9UGB7 285 aa19.3■□□□□ 0.68
PTPN4-208ENST00000460289 POLR3KQ9Y2Y1 108 aaPredicted RBP19.3■□□□□ 0.68
PTPN4-208ENST00000460289 CEACAM18A8MTB9 384 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 F5H0A9 414 aaPredicted RBP19.29■□□□□ 0.68
PTPN4-208ENST00000460289 PRKYO43930 277 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 ZNF205O95201 554 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 PTBP3O95758 552 aaKnown RBP19.29■□□□□ 0.68
PTPN4-208ENST00000460289 SNCBQ16143 134 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 ESCO2Q56NI9 601 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 PRAMEF6Q5VXH4 476 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 SLX4IPQ5VYV7 408 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 KRT77Q7Z794 578 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 C7orf69Q9H7B7 122 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 UFSP2Q9NUQ7 469 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 LRCH1Q9Y2L9 728 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 TMEM14AQ9Y6G1 99 aa19.29■□□□□ 0.68
PTPN4-208ENST00000460289 ZAR1LA6NP61 321 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 TCF21O43680 179 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 FAM20BO75063 409 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 AVPP01185 164 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 WNT2P09544 360 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 MPPED2Q15777 294 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 ZNF404Q494X3 552 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 DEGS2Q6QHC5 323 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 LRRN1Q6UXK5 716 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 FTMTQ8N4E7 242 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 CSNK2A3Q8NEV1 391 aa19.28■□□□□ 0.68
PTPN4-208ENST00000460289 OR8S1Q8NH09 359 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms