RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ZNF92Q03936 586 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 ARMCX4Q5H9R4 360 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 SLC35D3Q5M8T2 416 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 CD276Q5ZPR3 534 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 RBMS3Q6XE24 437 aaKnown RBP8.38□□□□□ -1.07
HDLBP-228ENST00000459788 DOK3Q7L591 496 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 PAPD5Q8NDF8 572 aaKnown RBP8.38□□□□□ -1.07
HDLBP-228ENST00000459788 BHLHE23Q8NDY6 225 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 CSNK2A3Q8NEV1 391 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 RAB40AQ8WXH6 277 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 UPRTQ96BW1 309 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 ZMYND19Q96E35 227 aaPredicted RBP8.38□□□□□ -1.07
HDLBP-228ENST00000459788 TMEM246Q9BRR3 403 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 THTPAQ9BU02 230 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 WDR76Q9H967 626 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 ZNF556Q9HAH1 456 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 ARMC1Q9NVT9 282 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 VNN3Q9NY84 501 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 FAM53CQ9NYF3 392 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 DNAJB9Q9UBS3 223 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 U3KQV3 271 aa8.38□□□□□ -1.07
HDLBP-228ENST00000459788 TRAV38-1A0A0B4J264 116 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 IGHV2-70DA0A0C4DH43 119 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 TCRBV3S1A0A5B6 114 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 ACOD1A6NK06 481 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 H3BN98 237 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 CLDN34H7C241 214 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 LGALS8O00214 317 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 GYG2O15488 501 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 SOX14O95416 240 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 CYB5R3P00387 301 aaPredicted RBP8.37□□□□□ -1.07
HDLBP-228ENST00000459788 OSMP13725 252 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 HSD11B1P28845 292 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 GSTT1P30711 240 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 CFHR2P36980 270 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 PMELP40967 661 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 MTNR1AP48039 350 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 PITPNBP48739 271 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 CDK5Q00535 292 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 SNAI3Q3KNW1 292 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 GLYATL3Q5SZD4 288 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 DEGS2Q6QHC5 323 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 C12orf54Q6X4T0 127 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 KRT74Q7RTS7 529 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 NAA40Q86UY6 237 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 TIGD4Q8IY51 512 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.37□□□□□ -1.07
HDLBP-228ENST00000459788 ZNF511Q8NB15 262 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 OR9Q1Q8NGQ5 310 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 OR6K6Q8NGW6 343 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 OTOSQ8NHW6 89 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 ZNF420Q8TAQ5 688 aaPredicted RBP8.37□□□□□ -1.07
HDLBP-228ENST00000459788 CANT1Q8WVQ1 401 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 ZNRF4Q8WWF5 429 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 CCDC124Q96CT7 223 aaKnown RBP8.37□□□□□ -1.07
HDLBP-228ENST00000459788 NIPSNAP1Q9BPW8 284 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 ADAT1Q9BUB4 502 aaKnown RBP8.37□□□□□ -1.07
HDLBP-228ENST00000459788 RNPEPL1Q9HAU8 725 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 SLC25A19Q9HC21 320 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 MMP26Q9NRE1 261 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 CLN8Q9UBY8 286 aa8.37□□□□□ -1.07
HDLBP-228ENST00000459788 ANKRD30BLA7E2S9 258 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 PRR23D1E9PI22 279 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 ENSAO43768 121 aaKnown RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 FAM20BO75063 409 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 E2F6O75461 281 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 ECDO95905 644 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 HLA-DPB1P04440 258 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 PRR23D2P0DMB1 279 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 MUC1P15941 1255 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 CA6P23280 308 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 DCTDP32321 178 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 CD80P33681 288 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 OPRL1P41146 370 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 CX3CR1P49238 355 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 RASSF2P50749 326 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 EIF2B1Q14232 305 aaKnown RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 FLOT2Q14254 428 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 TIGD6Q17RP2 521 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 WDR25Q64LD2 544 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 PRSS45Q7RTY3 260 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 DPY19L4Q7Z388 723 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 PARP8Q8N3A8 854 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 OR51L1Q8NGJ5 315 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 C12orf43Q96C57 262 aaKnown RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 SLC6A7Q99884 636 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 ABHD6Q9BV23 337 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 PRRG3Q9BZD7 231 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 OR10A2Q9H208 303 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 MMADHCQ9H3L0 296 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 PRDM13Q9H4Q3 707 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 CENPMQ9NSP4 180 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 PDP1Q9P0J1 537 aaPredicted RBP8.36□□□□□ -1.07
HDLBP-228ENST00000459788 ERVK-18Q9QC07 812 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 KAAG1Q9UBP8 84 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 ENOPH1Q9UHY7 261 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 MPC1Q9Y5U8 109 aa8.36□□□□□ -1.07
HDLBP-228ENST00000459788 hCG_38984A0A1B0GV85 526 aa8.35□□□□□ -1.07
HDLBP-228ENST00000459788 OOEPA6NGQ2 149 aa8.35□□□□□ -1.07
HDLBP-228ENST00000459788 TNFRSF13BO14836 293 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms