RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 GPR35Q9HC97 309 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 OBP2BQ9NPH6 170 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 GSN-AS1Q9NRJ2 163 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 MRPS18AQ9NVS2 196 aaKnown RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 CLEC5AQ9NY25 188 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 EXOGQ9Y2C4 368 aaKnown RBP9.05□□□□□ -0.96
USP39-210ENST00000459775 ZGRF1Q86YA3 2104 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 MED12LQ86YW9 2145 aa9.05□□□□□ -0.96
USP39-210ENST00000459775 TRGV8A0A0C4DH27 118 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 PNMA8CA0A1B0GUJ8 204 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 FIGNL2A6NMB9 653 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 PRRG2O14669 202 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 DHHO43323 396 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 TNFSF13O75888 250 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 AGFG2O95081 481 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 RAB36O95755 333 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 TGFAP01135 160 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 IFNA6P05013 189 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 CLEC3BP05452 202 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 LAP3P28838 519 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 GABARAPL2P60520 117 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ADAM8P78325 824 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 RAB40BQ12829 278 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 GUSBP1Q15486 140 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ACTBL2Q562R1 376 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 DDI2Q5TDH0 399 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 FAM214BQ7L5A3 538 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 PRSS48Q7RTY5 328 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 GLB1L2Q8IW92 636 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 DMRTC2Q8IXT2 367 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 SLC35F2Q8IXU6 374 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ZFP41Q8N8Y5 198 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 RNASE11Q8TAA1 199 aaKnown RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 FGFBP3Q8TAT2 258 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 TMEM45BQ96B21 275 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 MRPL48Q96GC5 212 aaKnown RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 ZNF486Q96H40 463 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 GMPPAQ96IJ6 420 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 FGF20Q9NP95 211 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 ACOT13Q9NPJ3 140 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 IFT46Q9NQC8 304 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 CNOT2Q9NZN8 540 aaKnown RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 OSGIN2Q9Y236 505 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 RCE1Q9Y256 329 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ZNF835Q9Y2P0 537 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 A0A087WXM4 84 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 MBD3L4A6NDZ8 208 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 MBD3L3A6NE82 208 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 MBD3L5A6NJ08 208 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 CD8B2A6NJW9 211 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 WDR1O75083 606 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 SS18L1O75177 396 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 LALBAP00709 142 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 PIPP12273 146 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 FCGR2AP12318 317 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 PSMB6P28072 239 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 SERPINF1P36955 418 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 OR12D2P58182 307 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 HSF2Q03933 536 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 MADCAM1Q13477 382 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 GGTLC2Q14390 218 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 IRF3Q14653 427 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 TP53I3Q53FA7 332 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 KLHL22Q53GT1 634 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 SLC35D3Q5M8T2 416 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ELP2Q6IA86 826 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 LIX1LQ8IVB5 337 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ZNF610Q8N9Z0 462 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 MBD3L2Q8NHZ7 208 aaPredicted RBP9.04□□□□□ -0.96
USP39-210ENST00000459775 NDNFQ8TB73 568 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 THEM6Q8WUY1 208 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 BORCS5Q969J3 196 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 NABP1Q96AH0 204 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 STARD4Q96DR4 205 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 SNX18Q96RF0 628 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ZNF251Q9BRH9 671 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 NGBQ9NPG2 151 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ERVK13-1Q9NX77 482 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 HAO2Q9NYQ3 351 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 MOKQ9UQ07 419 aa9.04□□□□□ -0.96
USP39-210ENST00000459775 ADGRG4Q8IZF6 3080 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 A0A0G2JNJ9 132 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 A0A1W2PR80 420 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 DAPL1A0PJW8 107 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 ZNF503-AS2A6NEH8 195 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 SERPINA3P01011 423 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 IGHA1P01876 353 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 GABRA1P14867 456 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 UQCRFS1P47985 274 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 MED22Q15528 200 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 FAM189A2Q15884 450 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 TFAP2EQ6VUC0 442 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 LHFPL4Q7Z7J7 247 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 SATL1Q86VE3 508 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 SELENOHQ8IZQ5 122 aaKnown RBP9.03□□□□□ -0.96
USP39-210ENST00000459775 ACBD7Q8N6N7 88 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 RHOVQ96L33 236 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
USP39-210ENST00000459775 ZNF416Q9BWM5 594 aa9.03□□□□□ -0.96
USP39-210ENST00000459775 UPB1Q9UBR1 384 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms