RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 C3orf80F5H4A9 247 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 IGHV1-69P01742 117 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 DDOSTP39656 456 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 RELBQ01201 579 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 TSPAN31Q12999 210 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 BOLLQ8N9W6 283 aaKnown RBP17.83■□□□□ 0.44
CPNE1-220ENST00000458038 OR2T4Q8NH00 348 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 GNPDA2Q8TDQ7 276 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 CCT8L2Q96SF2 557 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 SIRPDQ9H106 197 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 MMP27Q9H306 513 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 ADA2Q9NZK5 511 aa17.83■□□□□ 0.44
CPNE1-220ENST00000458038 PDP1Q9P0J1 537 aaPredicted RBP17.83■□□□□ 0.44
CPNE1-220ENST00000458038 BHLHE40O14503 412 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 SEMG1P04279 462 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 PRDX6P30041 224 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.82■□□□□ 0.44
CPNE1-220ENST00000458038 SNAI3Q3KNW1 292 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 RUSC1-AS1Q66K80 236 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 OR52L1Q8NGH7 329 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 C1orf123Q9NWV4 160 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 CD300AQ9UGN4 299 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 MAGEL2Q9UJ55 1249 aa17.82■□□□□ 0.44
CPNE1-220ENST00000458038 XRCC2O43543 280 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 LHBP01229 141 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 GRK5P34947 590 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 SLC35F1Q5T1Q4 408 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 TEX36Q5VZQ5 186 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 LINC00471Q8N535 108 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 PROKR2Q8NFJ6 384 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 DPAGT1Q9H3H5 408 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 FN3KQ9H479 309 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 RNF114Q9Y508 228 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 KPTNQ9Y664 436 aa17.81■□□□□ 0.44
CPNE1-220ENST00000458038 A6NLC8 198 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 DVL1O14640 695 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 KRT36O76013 467 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 HSD17B1P14061 328 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 MUC1P15941 1255 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-220ENST00000458038 SRSF4Q08170 494 aaKnown RBP17.8■□□□□ 0.44
CPNE1-220ENST00000458038 GLYATL3Q5SZD4 288 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 GDPGP1Q6ZNW5 385 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 BTN2A1Q7KYR7 527 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 LDLRAD3Q86YD5 345 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 GCSAMQ8N6F7 178 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 SCCPDHQ8NBX0 429 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 OR2AE1Q8NHA4 323 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 NPRL2Q8WTW4 380 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 LRTOMTQ8WZ04 291 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 LHX4Q969G2 390 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 DDOQ99489 341 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 KCNJ15Q99712 375 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 COPS4Q9BT78 406 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 CNTD2Q9H8S5 307 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 RNPEPL1Q9HAU8 725 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 SMURF1Q9HCE7 757 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 IL1RAPQ9NPH3 570 aa17.8■□□□□ 0.44
CPNE1-220ENST00000458038 CAB39Q9Y376 341 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-220ENST00000458038 hCG_1807616A0A1W2PRN6 198 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 GPR37O15354 613 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 GYPAP02724 150 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 FABP3P05413 133 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 GRPP07492 148 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 IER3P46695 156 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 ARF6P62330 175 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 TAF13Q15543 124 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 PCK2Q16822 640 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 MICBQ29980 383 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 DCXRQ7Z4W1 244 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 FAM90A1Q86YD7 464 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 SPSB4Q96A44 273 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 SP140LQ9H930 580 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 RPUSD1Q9UJJ7 312 aaKnown RBP17.79■□□□□ 0.44
CPNE1-220ENST00000458038 CDH10Q9Y6N8 788 aa17.79■□□□□ 0.44
CPNE1-220ENST00000458038 A0A0G2JK05 382 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 A0A1B0GVI7 797 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 ANKRD30BLA7E2S9 258 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 GPR137BO60478 399 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 TIPRLO75663 272 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 CLPXO76031 633 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 RRM2P31350 389 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 FMO3P31513 532 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 PYCR1P32322 319 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 SLC15A1P46059 708 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 HMGA2P52926 109 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 DBPQ10586 325 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-220ENST00000458038 CDONQ4KMG0 1287 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 HSP90B2PQ58FF3 399 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 TEX30Q5JUR7 227 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 ZDHHC21Q8IVQ6 265 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 RNF148Q8N7C7 305 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 OR56B2PQ8NGI1 322 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 LINC01006Q8NI28 216 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 NSMCE2Q96MF7 247 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 MYLK2Q9H1R3 596 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 RASSF4Q9H2L5 321 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 IL20Q9NYY1 176 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 FAM96BQ9Y3D0 163 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 V9GYQ6 96 aa17.78■□□□□ 0.44
CPNE1-220ENST00000458038 ZNF878C9JN71 531 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms