RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 LILRA4P59901 499 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SRSF4Q08170 494 aaKnown RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 CD47Q08722 323 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ECH1Q13011 328 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ZSWIM7Q19AV6 140 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TTLL9Q3SXZ7 439 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SOHLH1Q5JUK2 328 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 C6orf52Q5T4I8 152 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 FAM166AQ6J272 317 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TAPT1Q6NXT6 567 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 AADACL2Q6P093 401 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ZNF788Q6ZQV5 615 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TPRG1Q6ZUI0 275 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ASCL5Q7RTU5 278 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 C6orf120Q7Z4R8 191 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 CROCCP2Q86T23 111 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 CHSY1Q86X52 802 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 BAP18Q8IXM2 172 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SLC39A11Q8N1S5 342 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 PNLDC1Q8NA58 520 aaKnown RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 OR4E2Q8NGC2 313 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 OR56B4Q8NH76 319 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 OR13C6PQ8NH95 151 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 GNPDA2Q8TDQ7 276 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TM4SF18Q96CE8 201 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SEH1LQ96EE3 360 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 MRAP2Q96G30 205 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TIMD4Q96H15 378 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 KLHL32Q96NJ5 620 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ZNF184Q99676 751 aaPredicted RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 TRIM51Q9BSJ1 452 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 URM1Q9BTM9 101 aaKnown RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 FUNDC2Q9BWH2 189 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 CIPCQ9C0C6 399 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 RPF2Q9H7B2 306 aaKnown RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 SLCO1B3Q9NPD5 702 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 FBXO6Q9NRD1 293 aaPredicted RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 C1orf123Q9NWV4 160 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SS18L2Q9UHA2 77 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SLC17A4Q9Y2C5 497 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ZFP30Q9Y2G7 519 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 LSM4Q9Y4Z0 139 aaKnown RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 PLXNA1Q9UIW2 1896 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SPTBN4Q9H254 2564 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 KAT6AQ92794 2004 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 DDX60LQ5H9U9 1706 aaKnown RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 WDFY4Q6ZS81 3184 aa4.71□□□□□ -1.65
VPS41-209ENST00000457055 DUOX1Q9NRD9 1551 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 DNAH12Q6ZR08 3092 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 A0A096LPI6 279 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 A0A1B0GUS0 222 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TMEM150CB9EJG8 249 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 MANBAO00462 879 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 MSH4O15457 936 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 XRCC3O43542 346 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 FGF19O95750 216 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 BMP15O95972 392 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 HAND1O96004 215 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 IGHG4P01861 327 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 CT62P0C5K7 136 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 SLC35G4P0C7Q5 338 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TMEM225BP0DP42 221 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ZNF30P17039 623 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 HIST1H1TP22492 207 aaPredicted RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 AADACP22760 399 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 PTGER1P34995 402 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 DCTP40126 519 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 FOLR3P41439 243 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 HTR5AP47898 357 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TAS2R43P59537 309 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TPI1P60174 286 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 OSTNP61366 133 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 NTHL1P78549 312 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 RGS1Q08116 209 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 IL10RBQ08334 325 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 MFGE8Q08431 387 aaPredicted RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 GAGE5Q13069 117 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 GAGE6Q13070 117 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 MAD2L1Q13257 205 aaPredicted RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 FASTKQ14296 549 aaKnown RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 ZNF846Q147U1 533 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 RSU1Q15404 277 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 FCN2Q15485 313 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ZIC1Q15915 447 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 RPEL1Q2QD12 228 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TMEM97Q5BJF2 176 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TFDP3Q5H9I0 405 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ACTL10Q5JWF8 245 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 AVPI1Q5T686 147 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 HENMT1Q5T8I9 393 aaKnown RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 LYPLAL1Q5VWZ2 237 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 NANOGP8Q6NSW7 305 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 STEAP1BQ6NZ63 245 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TEX261Q6UWH6 196 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 UNQ9370/PRO34162Q6UXP9 181 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 LINC00336Q6ZUF6 198 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 MDGA2Q7Z553 956 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 PPP1R32Q7Z5V6 425 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 GALNT10Q86SR1 603 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ZNF547Q8IVP9 402 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms