RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 C1orf159Q96HA4 380 aa15.27■□□□□ 0.04
PDLIM2-215ENST00000456545 REEP6Q96HR9 211 aa15.27■□□□□ 0.04
PDLIM2-215ENST00000456545 CNN2Q99439 309 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-215ENST00000456545 MROQ9BYG7 248 aa15.27■□□□□ 0.04
PDLIM2-215ENST00000456545 FN1P02751 2386 aaKnown RBP15.27■□□□□ 0.03
PDLIM2-215ENST00000456545 C5orf63A6NC05 138 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 CCDC182A6NF36 153 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 GMDSO60547 372 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 ALOX5APP20292 161 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 POLR2IP36954 125 aaKnown RBP15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 CDC42P60953 191 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 KRTAP21-3Q3LHN1 58 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 C1orf87Q8N0U7 546 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 OR56B2PQ8NGI1 322 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 ASB17Q8WXJ9 295 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 TMEM186Q96B77 213 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 ADAT1Q9BUB4 502 aaKnown RBP15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 DCAF16Q9NXF7 216 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 MRPL15Q9P015 296 aaKnown RBP15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 IKZF2Q9UKS7 526 aa15.26■□□□□ 0.03
PDLIM2-215ENST00000456545 MALRD1Q5VYJ5 2156 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 H3BNX3 289 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 TMEM178BH3BS89 294 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 PSMD9O00233 223 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 IGHV2-5P01817 119 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 SRD5A1P18405 259 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 ATP6V1E1P36543 226 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 SRP14P37108 136 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 BTG1P62324 171 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 IL17RELQ6ZVW7 336 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 SPICQ8N5J4 248 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 CELF2-AS1Q8N7Q2 184 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 SPERTQ8NA61 448 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 OR8S1Q8NH09 359 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 STMN2Q93045 179 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 SPSB4Q96A44 273 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 GABARAPL3Q9BY60 117 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 RGCCQ9H4X1 137 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 S100A14Q9HCY8 104 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 UFSP2Q9NUQ7 469 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 HIF1ANQ9NWT6 349 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 IMPAD1Q9NX62 359 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 KLHDC2Q9Y2U9 406 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 LRP12Q9Y561 859 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 TANC2Q9HCD6 1990 aa15.25■□□□□ 0.03
PDLIM2-215ENST00000456545 TRAV20A0A0B4J274 112 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 ZNF670-ZNF695F2Z2N8 137 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 EI24O14681 340 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 PHYHO14832 338 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 BAG2O95816 211 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 CYB5R3P00387 301 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 FAM157CP0CG43 387 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 GNALP38405 381 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 MMP16P51512 607 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 FAM3AP98173 230 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 HNRNPA0Q13151 305 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 SNCBQ16143 134 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 ZIK1Q3SY52 487 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 AADACL4Q5VUY2 407 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 FAHD2BQ6P2I3 314 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 DEGS2Q6QHC5 323 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 KLBQ86Z14 1044 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 SLC35F2Q8IXU6 374 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 MUC20Q8N307 709 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 FTMTQ8N4E7 242 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 OR8J1Q8NGP2 316 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 ERGIC1Q969X5 290 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 FAHD2AQ96GK7 314 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 MNTQ99583 582 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 C9orf16Q9BUW7 83 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 TTTY10Q9BZA0 68 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 FN3KRPQ9HA64 309 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 C14orf119Q9NWQ9 140 aa15.24■□□□□ 0.03
PDLIM2-215ENST00000456545 NSD1Q96L73 2696 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 NF1P21359 2839 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 TMEM269A0A1B0GVZ9 245 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 ZNF254O75437 659 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 IGHV2-70P01814 119 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 GRPP07492 148 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 ANOS1P23352 680 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 RBMXP38159 391 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 MDH2P40926 338 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 CD200P41217 278 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 GSK3AP49840 483 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 ALDH3A2P51648 485 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 RIDAP52758 137 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 EFNB1P98172 346 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 MAB21L1Q13394 359 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 LRRC28Q86X40 367 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 COMMD2Q86X83 199 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 PRIMA1Q86XR5 153 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 ZNF679Q8IYX0 411 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 CSNK2A3Q8NEV1 391 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 OR51G2Q8NGK0 314 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 FAM81AQ8TBF8 368 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 RFKQ969G6 155 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 USE1Q9NZ43 259 aa15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 WARS2Q9UGM6 360 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-215ENST00000456545 ZFHX3Q15911 3703 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms