RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OR2B2Q9GZK3 357 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 PNRC2Q9NPJ4 139 aaKnown RBP12.01□□□□□ -0.49
CLK3-203ENST00000454830 NAP1L6A6NFF2 107 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 TMED4Q7Z7H5 227 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 BIVMQ86UB2 503 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 TUSC5Q8IXB3 177 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 OR4D10Q8NGI6 311 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 OR51S1Q8NGJ8 323 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 OR10K1Q8NGX5 313 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 TMEM246Q9BRR3 403 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 OR10A2Q9H208 303 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 NCKAP5O14513 1909 aa12.01□□□□□ -0.49
CLK3-203ENST00000454830 ZNF716A6NP11 495 aa12□□□□□ -0.49
CLK3-203ENST00000454830 H7C417 338 aa12□□□□□ -0.49
CLK3-203ENST00000454830 DNPH1O43598 174 aa12□□□□□ -0.49
CLK3-203ENST00000454830 TOXO94900 526 aa12□□□□□ -0.49
CLK3-203ENST00000454830 SP1P08047 785 aa12□□□□□ -0.49
CLK3-203ENST00000454830 CSF1P09603 554 aa12□□□□□ -0.49
CLK3-203ENST00000454830 OR3A4PP47883 348 aa12□□□□□ -0.49
CLK3-203ENST00000454830 SCRN3Q0VDG4 424 aa12□□□□□ -0.49
CLK3-203ENST00000454830 SF3B4Q15427 424 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■■■□ 20.4
CLK3-203ENST00000454830 ZNF100Q8IYN0 542 aa12□□□□□ -0.49
CLK3-203ENST00000454830 ACTR6Q9GZN1 396 aa12□□□□□ -0.49
CLK3-203ENST00000454830 C12orf49Q9H741 205 aa12□□□□□ -0.49
CLK3-203ENST00000454830 MTFP1Q9UDX5 166 aa12□□□□□ -0.49
CLK3-203ENST00000454830 ZNF318Q5VUA4 2279 aa12□□□□□ -0.49
CLK3-203ENST00000454830 E9PLN8 166 aa12□□□□□ -0.49
CLK3-203ENST00000454830 TNFRSF10AO00220 468 aa12□□□□□ -0.49
CLK3-203ENST00000454830 ZNF24P17028 368 aa12□□□□□ -0.49
CLK3-203ENST00000454830 SCAND1P57086 179 aa12□□□□□ -0.49
CLK3-203ENST00000454830 MRPS34P82930 218 aaKnown RBP12□□□□□ -0.49
CLK3-203ENST00000454830 SLC10A1Q14973 349 aa12□□□□□ -0.49
CLK3-203ENST00000454830 TSPO2Q5TGU0 170 aa12□□□□□ -0.49
CLK3-203ENST00000454830 ZNF584Q8IVC4 421 aa12□□□□□ -0.49
CLK3-203ENST00000454830 NUDCD2Q8WVJ2 157 aa12□□□□□ -0.49
CLK3-203ENST00000454830 IFT46Q9NQC8 304 aa12□□□□□ -0.49
CLK3-203ENST00000454830 TAS2R8Q9NYW2 309 aa12□□□□□ -0.49
CLK3-203ENST00000454830 FAM172BPA6NC97 362 aa12□□□□□ -0.49
CLK3-203ENST00000454830 RAB3DO95716 219 aa12□□□□□ -0.49
CLK3-203ENST00000454830 APOC1P02654 83 aa12□□□□□ -0.49
CLK3-203ENST00000454830 AMY2AP04746 511 aa12□□□□□ -0.49
CLK3-203ENST00000454830 AKAIN1P0CW23 69 aa12□□□□□ -0.49
CLK3-203ENST00000454830 FCGR2AP12318 317 aa12□□□□□ -0.49
CLK3-203ENST00000454830 RAD52P43351 418 aa12□□□□□ -0.49
CLK3-203ENST00000454830 ACTBP60709 375 aa12□□□□□ -0.49
CLK3-203ENST00000454830 ACTG1P63261 375 aa12□□□□□ -0.49
CLK3-203ENST00000454830 KCNMB1Q16558 191 aa12□□□□□ -0.49
CLK3-203ENST00000454830 ST3GAL2Q16842 350 aa12□□□□□ -0.49
CLK3-203ENST00000454830 CCDC92Q53HC0 331 aaPredicted RBP12□□□□□ -0.49
CLK3-203ENST00000454830 CD163Q86VB7 1156 aa12□□□□□ -0.49
CLK3-203ENST00000454830 ADAMTS17Q8TE56 1095 aa12□□□□□ -0.49
CLK3-203ENST00000454830 SLC25A28Q96A46 364 aa12□□□□□ -0.49
CLK3-203ENST00000454830 NABP1Q96AH0 204 aa12□□□□□ -0.49
CLK3-203ENST00000454830 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
CLK3-203ENST00000454830 FOXD3Q9UJU5 478 aaPredicted RBP12□□□□□ -0.49
CLK3-203ENST00000454830 RAB22AQ9UL26 194 aa12□□□□□ -0.49
CLK3-203ENST00000454830 PMP22Q01453 160 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 CDNFQ49AH0 187 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 FAM27BQ5VT28 67 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 PGAP1Q75T13 922 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 PIAS4Q8N2W9 510 aaPredicted RBP11.99□□□□□ -0.49
CLK3-203ENST00000454830 GPR173Q9NS66 373 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 HSPB11Q9Y547 144 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 A0A1W2PP11 408 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 FAM230AA0A1W2PPH8 454 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 FABP7O15540 132 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 CD79AP11912 226 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 GNB3P16520 340 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 SERPINA2P20848 420 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 GFRA1P56159 465 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 GSG1Q2KHT4 349 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 STEAP1BQ6NZ63 245 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 OR4S1Q8NGB4 309 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 TNFAIP8L1Q8WVP5 186 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 MTRF1O75570 445 aaKnown RBP11.99□□□□□ -0.49
CLK3-203ENST00000454830 HPXP02790 462 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 VSIG8P0DPA2 414 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 RRADP55042 308 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 ARFRP1Q13795 201 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 SNAI3Q3KNW1 292 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 ZNF766Q5HY98 468 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 GPR35Q9HC97 309 aa11.99□□□□□ -0.49
CLK3-203ENST00000454830 LIPCP11150 499 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 CXCL3P19876 107 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 FAPQ12884 760 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 C4orf46Q504U0 113 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 C11orf88Q6PI97 169 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 NCCRP1Q6ZVX7 275 aaPredicted RBP11.98□□□□□ -0.49
CLK3-203ENST00000454830 TRAPPC6BQ86SZ2 158 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 OR1F12Q8NHA8 337 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 SLCO5A1Q9H2Y9 848 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 METTL17Q9H7H0 456 aaPredicted RBP11.98□□□□□ -0.49
CLK3-203ENST00000454830 ZNF736B4DX44 427 aaPredicted RBP11.98□□□□□ -0.49
CLK3-203ENST00000454830 ANXA3P12429 323 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 GNG2P59768 71 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 FAM166AQ6J272 317 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 CPT1CQ8TCG5 803 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 ADGRG7Q96K78 797 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 NICN1Q9BSH3 213 aa11.98□□□□□ -0.49
CLK3-203ENST00000454830 TMEM59Q9BXS4 323 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms