RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TMEM86BQ8N661 226 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GCSAMQ8N6F7 178 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 KLHDC1Q8N7A1 406 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PCYOX1LQ8NBM8 494 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR5T2Q8NGG2 359 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR9Q1Q8NGQ5 310 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FNDC8Q8TC99 324 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LRRC29Q8WV35 223 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNRF4Q8WWF5 429 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 H1FXQ92522 213 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF799Q96GE5 643 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ERMAPQ96PL5 475 aaPredicted RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TRIM15Q9C019 465 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NSRP1Q9H0G5 558 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NMNAT1Q9HAN9 279 aaPredicted RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SRA1Q9HD15 236 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NRIP3Q9NQ35 241 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SNTG1Q9NSN8 517 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FGFR1OP2Q9NVK5 253 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MRPL22Q9NWU5 206 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ERVK-18Q9QC07 812 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RNF7Q9UBF6 113 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RPUSD1Q9UJJ7 312 aaKnown RBP4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM96BQ9Y3D0 163 aa4.92□□□□□ -1.62
HLA-DPA3-207ENST00000454398 STAB2Q8WWQ8 2551 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MEX3AA1L020 520 aaKnown RBP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MEIOCA2RUB1 952 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR6C68A6NDL8 312 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 BTBD17A6NE02 478 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GGT3PA6NGU5 568 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 UNC119BA6NIH7 251 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 H3BUX3 64 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IFNL4K9M1U5 179 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NPFFO15130 113 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PAHP00439 452 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IFNA14P01570 189 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GYPBP06028 91 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 H1F0P07305 194 aaKnown RBP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SPARCP09486 303 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 VSIG10L2P0DP72 767 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TROVE2P10155 538 aaKnown RBP eCLIP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 AMY2BP19961 511 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MDH1P40925 334 aaKnown RBP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OMPP47874 163 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GSK3BP49841 420 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PRKXP51817 358 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SELENOWP63302 87 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MALLQ13021 153 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OCLNQ16625 522 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RFX4Q33E94 735 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NSUN5P1Q3KNT7 163 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TMEM95Q3KNT9 176 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ANKDD1AQ495B1 522 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CDONQ4KMG0 1287 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 DMRTC1Q5HYR2 192 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SAMD5Q5TGI4 173 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 COLCA1Q6ZS62 124 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TMPRSS11FQ6ZWK6 438 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RNF148Q8N7C7 305 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 Q8N7P7 452 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PNLDC1Q8NA58 520 aaKnown RBP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZSCAN4Q8NAM6 433 aaPredicted RBP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM156AQ8NDB6 213 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GJC3Q8NFK1 279 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR5L1Q8NGL2 311 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TBC1D15Q8TC07 691 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MRAPQ8TCY5 172 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM162AQ96A26 154 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM71F1Q96KD3 344 aaPredicted RBP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MAGEB18Q96M61 343 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 COG8Q96MW5 612 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR5M11Q96RB7 305 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GPX7Q96SL4 187 aaPredicted RBP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 COPS4Q9BT78 406 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FGF23Q9GZV9 251 aaPredicted RBP4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 WDR13Q9H1Z4 485 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SAR1AQ9NR31 198 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TAS2R1Q9NYW7 299 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 DNAJC27Q9NZQ0 273 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NDUFAF4Q9P032 175 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ATPIF1Q9UII2 106 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ENPP4Q9Y6X5 453 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 COMMD3-BMI1R4GMX3 469 aa4.91□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TRAV38-1A0A0B4J264 116 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 A0A1W2PRX2 142 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ANKRD61A6NGH8 418 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 J3QW42 95 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GSTA4O15217 222 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TBX1O43435 398 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ANGPTL7O43827 346 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OPN1MWP04001 364 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FBP1P09467 338 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OPN1MW2P0DN77 364 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OPN1MW3P0DN78 364 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CLUP10909 449 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 JUNBP17275 347 aaPredicted RBP4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 COX7A1P24310 79 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 IFNA8P32881 189 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BMXP51813 675 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SPIBQ01892 262 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms