RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 PTGES3LE9PB15 166 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 CDK1P06493 297 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 HEXAP06865 529 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 LIMS3P0CW19 117 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 LIMS4P0CW20 117 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 DAOP14920 347 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 SLC25A16P16260 332 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 SLC6A9P48067 706 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 ZNF829Q3KNS6 432 aaPredicted RBP12.5□□□□□ -0.41
VPS16-205ENST00000453689 ZNF684Q5T5D7 378 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 COLCA1Q6ZS62 124 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 Q71RC1 249 aaPredicted RBP12.5□□□□□ -0.41
VPS16-205ENST00000453689 KCTD20Q7Z5Y7 419 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 EGFL6Q8IUX8 553 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 YIPF7Q8N8F6 280 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 UBASH3BQ8TF42 649 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 GTF3AQ92664 365 aaKnown RBP12.5□□□□□ -0.41
VPS16-205ENST00000453689 APOBEC3DQ96AK3 386 aaPredicted RBP12.5□□□□□ -0.41
VPS16-205ENST00000453689 COG8Q96MW5 612 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 ZNF649Q9BS31 505 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 YTHDF1Q9BYJ9 559 aaKnown RBP12.5□□□□□ -0.41
VPS16-205ENST00000453689 DUSP21Q9H596 190 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 SP140LQ9H930 580 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 PAK1IP1Q9NWT1 392 aaPredicted RBP12.5□□□□□ -0.41
VPS16-205ENST00000453689 LRCH1Q9Y2L9 728 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 STARD10Q9Y365 291 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 ABCA1O95477 2261 aa12.5□□□□□ -0.41
VPS16-205ENST00000453689 C17orf100A8MU93 164 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 VWC2LB2RUY7 222 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 NDUFS8O00217 210 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 MAGEB4O15481 346 aaPredicted RBP12.49□□□□□ -0.41
VPS16-205ENST00000453689 HPXP02790 462 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 LCATP04180 440 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 ANXA2P07355 339 aaKnown RBP12.49□□□□□ -0.41
VPS16-205ENST00000453689 TACSTD2P09758 323 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 SLC2A1P11166 492 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 MAGEB1P43366 347 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 ETV1P50549 477 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
VPS16-205ENST00000453689 GABARAPL2P60520 117 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 KRTAP1-1Q07627 177 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 MOGQ16653 247 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 TP53I3Q53FA7 332 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 NAA40Q86UY6 237 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 SYS1Q8N2H4 156 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 KLHL36Q8N4N3 616 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 OR5L1Q8NGL2 311 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 C4orf36Q96KX1 117 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 PIMREGQ9BSJ6 248 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 MOB1AQ9H8S9 216 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 FAM206AQ9NX38 181 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 GNG8Q9UK08 70 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 CAB39Q9Y376 341 aaPredicted RBP12.49□□□□□ -0.41
VPS16-205ENST00000453689 R4GMQ9 66 aa12.49□□□□□ -0.41
VPS16-205ENST00000453689 MALRD1Q5VYJ5 2156 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 TMEM269A0A1B0GVZ9 245 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 ACOD1A6NK06 481 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 LYNX1G3V0Z9 82 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 J3QLW9 94 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 RGS10O43665 173 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 NCR1O76036 304 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 MT-ND5P03915 603 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 LYNX1P0DP58 116 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 ZNF19P17023 458 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 TUBG1P23258 451 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 C21orf33P30042 268 aaPredicted RBP12.48□□□□□ -0.41
VPS16-205ENST00000453689 NR4A2P43354 598 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 MMP15P51511 669 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 MMP16P51512 607 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 OR12D2P58182 307 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 MVKQ03426 396 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 LOXL1Q08397 574 aaPredicted RBP12.48□□□□□ -0.41
VPS16-205ENST00000453689 PSG7Q13046 419 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 RNLSQ5VYX0 342 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 TMPRSS11AQ6ZMR5 421 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 PRSS45Q7RTY3 260 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 OR52N1Q8NH53 320 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 SGCDQ92629 289 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 CDCA4Q9BXL8 241 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 TUBG2Q9NRH3 451 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 ACOXLQ9NUZ1 547 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 NKIRAS2Q9NYR9 191 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 ERVK-18Q9QC07 812 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 ZANQ9Y493 2812 aa12.48□□□□□ -0.41
VPS16-205ENST00000453689 ZSCAN5BA6NJL1 495 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 LOC110117498-PIK3R3F6TDL0 507 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 MYL12BO14950 172 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 TIMM8AO60220 97 aaPredicted RBP12.47□□□□□ -0.41
VPS16-205ENST00000453689 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
VPS16-205ENST00000453689 RPP14O95059 124 aaKnown RBP12.47□□□□□ -0.41
VPS16-205ENST00000453689 MT-ND2P03891 347 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 EEF1B2P24534 225 aaKnown RBP12.47□□□□□ -0.41
VPS16-205ENST00000453689 COL8A2P25067 703 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 GIFP27352 417 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 ZNF81P51508 661 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 CCL8P80075 99 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
VPS16-205ENST00000453689 MALLQ13021 153 aa12.47□□□□□ -0.41
VPS16-205ENST00000453689 MRPL28Q13084 256 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms