RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 C1QL2Q7Z5L3 287 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 LRRC28Q86X40 367 aaPredicted RBP8.12□□□□□ -1.11
USP54-207ENST00000451492 KLBQ86Z14 1044 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 CPOQ8IVL8 374 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 C1orf87Q8N0U7 546 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.12□□□□□ -1.11
USP54-207ENST00000451492 OR11L1Q8NGX0 322 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 ZNF418Q8TF45 676 aaPredicted RBP8.12□□□□□ -1.11
USP54-207ENST00000451492 REEP6Q96HR9 211 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 PGAM5Q96HS1 289 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 TMEM246Q9BRR3 403 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 SSBP3Q9BWW4 388 aaPredicted RBP8.12□□□□□ -1.11
USP54-207ENST00000451492 DNAJB9Q9UBS3 223 aa8.12□□□□□ -1.11
USP54-207ENST00000451492 PPIAL4EA0A075B759 164 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 F5H0A9 414 aaPredicted RBP8.11□□□□□ -1.11
USP54-207ENST00000451492 PPIAL4DF5H284 164 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 J3QLI3 93 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 PSMD9O00233 223 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 XRCC2O43543 280 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 PPIAL4FP0DN26 164 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 THBS2P35442 1172 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 CD200P41217 278 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 SLC15A1P46059 708 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 BLVRAP53004 296 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 HCCSP53701 268 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 ZNF121P58317 390 aaPredicted RBP8.11□□□□□ -1.11
USP54-207ENST00000451492 ACTG1P63261 375 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 BNIP1Q12981 228 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 SCGB2A2Q13296 93 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 APOFQ13790 326 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 OR8B8Q15620 311 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 SNAPC1Q16533 368 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 PCK2Q16822 640 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 TEX30Q5JUR7 227 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 LYPD2Q6UXB3 125 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 LRRN1Q6UXK5 716 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 ZNF826PQ6ZT77 177 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 SHFQ7M4L6 423 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 SLC16A9Q7RTY1 509 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.11□□□□□ -1.11
USP54-207ENST00000451492 TIGD4Q8IY51 512 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 BPIFB2Q8N4F0 458 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 SEMA6DQ8NFY4 1073 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 OR8B3Q8NGG8 313 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 OR8S1Q8NH09 359 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 NANPQ8TBE9 248 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 TECTBQ96PL2 329 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 OR8B2Q96RD0 313 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 MRI1Q9BV20 369 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 TOR3AQ9H497 397 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 PPP1R3EQ9H7J1 279 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 MARCH7Q9H992 704 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 FN3KRPQ9HA64 309 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 TMEM165Q9HC07 324 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 PAPOLBQ9NRJ5 636 aaKnown RBP8.11□□□□□ -1.11
USP54-207ENST00000451492 C1orf123Q9NWV4 160 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 TVP23BQ9NYZ1 205 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 OPN4Q9UHM6 478 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 LRCH1Q9Y2L9 728 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 KLHDC2Q9Y2U9 406 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 PPIAL4AQ9Y536 164 aa8.11□□□□□ -1.11
USP54-207ENST00000451492 IGHV3OR15-7A0A075B7D8 119 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.1□□□□□ -1.11
USP54-207ENST00000451492 ANKRD30BLA7E2S9 258 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 IFNL4K9M1U5 179 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 HAX1O00165 279 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 GMDSO60547 372 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 MITFO75030 526 aaPredicted RBP8.1□□□□□ -1.11
USP54-207ENST00000451492 HMGN1P05114 100 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 GATA3P23771 443 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 PITPNBP48739 271 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 DAPP51397 102 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 CRISP1P54107 249 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 GMFBP60983 142 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 CDK5Q00535 292 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 POU4F2Q12837 409 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 ZNF154Q13106 437 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 ZNF404Q494X3 552 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 C1orf146Q5VVC0 180 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 NLRC3Q7RTR2 1065 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 BCDIN3DQ7Z5W3 292 aaKnown RBP8.1□□□□□ -1.11
USP54-207ENST00000451492 KRT77Q7Z794 578 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 AMIGO2Q86SJ2 522 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 OR5K1Q8NHB7 308 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 RNF133Q8WVZ7 376 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 NEIL1Q96FI4 390 aaPredicted RBP8.1□□□□□ -1.11
USP54-207ENST00000451492 DUX5Q96PT3 197 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 PAPOLGQ9BWT3 736 aaKnown RBP8.1□□□□□ -1.11
USP54-207ENST00000451492 TEX12Q9BXU0 123 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 OR10A2Q9H208 303 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 NTN4Q9HB63 628 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 SLC25A19Q9HC21 320 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 KRT84Q9NSB2 600 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 MRPL15Q9P015 296 aaKnown RBP8.1□□□□□ -1.11
USP54-207ENST00000451492 RNF7Q9UBF6 113 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 MIOXQ9UGB7 285 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 LAMP5Q9UJQ1 280 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 NOP16Q9Y3C1 178 aaKnown RBP8.1□□□□□ -1.11
USP54-207ENST00000451492 LRP12Q9Y561 859 aa8.1□□□□□ -1.11
USP54-207ENST00000451492 AUP1Q9Y679 476 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms