RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ZNF250P15622 560 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 GALP22466 123 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 SERPINF1P36955 418 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 PSMB10P40306 273 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 GTF2A1P52655 376 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-202ENST00000451053 MFGE8Q08431 387 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-202ENST00000451053 MST1LQ2TV78 715 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 TMEM255AQ5JRV8 349 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 BCL2L15Q5TBC7 163 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 PAMR1Q6UXH9 720 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 UNQ6126/PRO20091Q6UXV3 157 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 FAM57BQ71RH2 274 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 DTX2Q86UW9 622 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 CLVS1Q8IUQ0 354 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-202ENST00000451053 MUC15Q8N387 334 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 OR2G2Q8NGZ5 317 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF420Q8TAQ5 688 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-202ENST00000451053 RPS4Y2Q8TD47 263 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 KLF14Q8TD94 323 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-202ENST00000451053 THRSPQ92748 146 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 TRAF4Q9BUZ4 470 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-202ENST00000451053 FUNDC2Q9BWH2 189 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 FAIMQ9NVQ4 179 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF319Q9P2F9 582 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 GTF2A1LQ9UNN4 478 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 LAMP3Q9UQV4 416 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 PLEKHA6Q9Y2H5 1048 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 FBN2P35556 2912 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 HRNRQ86YZ3 2850 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-202ENST00000451053 PNMA8CA0A1B0GUJ8 204 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 CCDC160A6NGH7 325 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 A6NHS1 94 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF701M0R085 212 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-202ENST00000451053 TBX1O43435 398 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 ATE1O95260 518 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 PNPP00491 289 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 SERPINA3P01011 423 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 HLA-DPB1P04440 258 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 UBCP0CG48 685 aaKnown RBP11.17□□□□□ -0.62
VPS33A-202ENST00000451053 TGFBR2P37173 567 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 TMBIM6P55061 237 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 PRSS12P56730 875 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 SLC3A1Q07837 685 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 DOC2BQ14184 412 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 HLXQ14774 488 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-202ENST00000451053 EFNB3Q15768 340 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 SSX1Q16384 188 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF718Q3SXZ3 478 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 GLYATL3Q5SZD4 288 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 AGAP6Q5VW22 663 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 GPR107Q5VW38 600 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 MBNL2Q5VZF2 373 aaKnown RBP11.17□□□□□ -0.62
VPS33A-202ENST00000451053 C11orf71Q6IPW1 123 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 GDPGP1Q6ZNW5 385 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 CATSPERDQ86XM0 798 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 ANKRD13BQ86YJ7 626 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 C1orf174Q8IYL3 243 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF676Q8N7Q3 588 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 ZFP41Q8N8Y5 198 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 OR52H1Q8NGJ2 320 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 OR5L1Q8NGL2 311 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 OR5AK2Q8NH90 309 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 OR2AE1Q8NHA4 323 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 SYNPRQ8TBG9 265 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 RAB2BQ8WUD1 216 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 IGFBPL1Q8WX77 278 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 PGAM5Q96HS1 289 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 CCL19Q99731 98 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 PLK3Q9H4B4 646 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 CBLN4Q9NTU7 201 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 FAM206AQ9NX38 181 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 NUFIP1Q9UHK0 495 aaKnown RBP11.17□□□□□ -0.62
VPS33A-202ENST00000451053 DUSP13Q9UII6 198 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 ENPP5Q9UJA9 477 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 OR52A1Q9UKL2 312 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 STUB1Q9UNE7 303 aa11.17□□□□□ -0.62
VPS33A-202ENST00000451053 IGLV3-9A0A075B6K5 115 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 VSTM5A8MXK1 200 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 B9A039 149 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 RAF1P04049 648 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 GCH1P30793 250 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 KLF3P57682 345 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF92Q03936 586 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 GK2Q14410 553 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-202ENST00000451053 SWI5Q1ZZU3 235 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 ALKBH6Q3KRA9 238 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 YIF1BQ5BJH7 314 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 WDR38Q5JTN6 314 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 FBXW12Q6X9E4 464 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 OR8B12Q8NGG6 310 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 GHSRQ92847 366 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 PPP1R14AQ96A00 147 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 RNF166Q96A37 237 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-202ENST00000451053 CMBLQ96DG6 245 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 FRRS1LQ9P0K9 344 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 SSR3Q9UNL2 185 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF281Q9Y2X9 895 aa11.16□□□□□ -0.62
VPS33A-202ENST00000451053 SIRT4Q9Y6E7 314 aaPredicted RBP11.16□□□□□ -0.62
VPS33A-202ENST00000451053 ROS1P08922 2347 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 NBPF19A0A087WUL8 3843 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms