RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 OPA3Q9H6K4 179 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 TUBG2Q9NRH3 451 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 HHLA2Q9UM44 414 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 CHD6Q8TD26 2715 aa12.11□□□□□ -0.47
SHMT2-203ENST00000449049 CACNA1CQ13936 2221 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 DIDO1Q9BTC0 2240 aaKnown RBP12.1□□□□□ -0.47
SHMT2-203ENST00000449049 TRBV5-5A0A0J9YX44 114 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 CASKO14936 926 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 SIAH2O43255 324 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 ATE1O95260 518 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 GALP22466 123 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 GADD45AP24522 165 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 CRYBB2P43320 205 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 PPP1CBP62140 327 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 FABP5Q01469 135 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 ZNF92Q03936 586 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 GFOD2Q3B7J2 385 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 DOK3Q7L591 496 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 CCDC54Q8NEL0 328 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 NUP37Q8NFH4 326 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 OR51A4Q8NGJ6 313 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 OR1J1Q8NGS3 322 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 GPR148Q8TDV2 347 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 SOX7Q9BT81 388 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 ITGB1BP2Q9UKP3 347 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 STUB1Q9UNE7 303 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 SPEF1Q9Y4P9 236 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 hCG_38984A0A1B0GV85 526 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 A0A1B0GVI7 797 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 LOC390937A0A1W2PQ73 354 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 SYT7O43581 403 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 RGS9O75916 674 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-203ENST00000449049 SERPINA3P01011 423 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 HLA-DPB1P04440 258 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 CFL1P23528 166 aaKnown RBP12.1□□□□□ -0.47
SHMT2-203ENST00000449049 LOXP28300 417 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-203ENST00000449049 GK2Q14410 553 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-203ENST00000449049 TMEM91Q6ZNR0 172 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 COMMD2Q86X83 199 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 ANKRD13BQ86YJ7 626 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-203ENST00000449049 REPIN1Q9BWE0 567 aaKnown RBP12.1□□□□□ -0.47
SHMT2-203ENST00000449049 OR51E2Q9H255 320 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 PTTG3PQ9NZH4 202 aa12.1□□□□□ -0.47
SHMT2-203ENST00000449049 UBR5O95071 2799 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-203ENST00000449049 TRDV1A0A1B0GX56 115 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 PRSS44E7EML9 344 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 GPX5O75715 221 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 DHRS3O75911 302 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 PSMD7P51665 324 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 ERVS71-1P61550 626 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 FAM3AP98173 230 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 SNTB2Q13425 540 aaKnown RBP12.09□□□□□ -0.47
SHMT2-203ENST00000449049 TIMM50Q3ZCQ8 353 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 Q499Y3 187 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 GPR107Q5VW38 600 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 SLC16A12Q6ZSM3 486 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 OR14K1Q8NGZ2 314 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 SLC25A40Q8TBP6 338 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 MARS2Q96GW9 593 aaKnown RBP12.09□□□□□ -0.47
SHMT2-203ENST00000449049 RADILQ96JH8 1075 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 FAM71F1Q96KD3 344 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-203ENST00000449049 ENPP5Q9UJA9 477 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 V9GYS6 101 aa12.09□□□□□ -0.47
SHMT2-203ENST00000449049 GABRPO00591 440 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 MTRF1O75570 445 aaKnown RBP12.08□□□□□ -0.47
SHMT2-203ENST00000449049 CD3EP07766 207 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 ZNF12P17014 697 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 GLRXP35754 106 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 INSL4Q14641 139 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 OR8B8Q15620 311 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 ACSM3Q53FZ2 586 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.47
SHMT2-203ENST00000449049 TSEN15Q8WW01 171 aaKnown RBP12.08□□□□□ -0.47
SHMT2-203ENST00000449049 THRSPQ92748 146 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 TRMT61AQ96FX7 289 aaKnown RBP12.08□□□□□ -0.47
SHMT2-203ENST00000449049 OR14A2Q96R54 314 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 OR2J1Q9GZK6 312 aa12.08□□□□□ -0.47
SHMT2-203ENST00000449049 DHRS7CA6NNS2 312 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 SHISA9B4DS77 424 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF879B4DU55 563 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 H3BSH0 61 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 GATBO75879 557 aaKnown RBP12.08□□□□□ -0.48
SHMT2-203ENST00000449049 GABARAPO95166 117 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 CLDN1O95832 211 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 OCM2P0CE71 109 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 FGF9P31371 208 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-203ENST00000449049 MAGEB1P43366 347 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 TNK1Q13470 666 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-203ENST00000449049 SPATA46Q5T0L3 261 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 MBNL2Q5VZF2 373 aaKnown RBP12.08□□□□□ -0.48
SHMT2-203ENST00000449049 ADAM5Q6NVV9 412 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 SLC22A25Q6T423 547 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 MEX3BQ6ZN04 569 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms