RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 DUSP21Q9H596 190 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 CDH20Q9HBT6 801 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 PLEK2Q9NYT0 353 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 TREM2Q9NZC2 230 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 CNOT2Q9NZN8 540 aaKnown RBP11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 TAAR3PQ9P1P4 343 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 MYEF2Q9P2K5 600 aaKnown RBP11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 FZR1Q9UM11 496 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 TPRKBQ9Y3C4 175 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 TIMM10BQ9Y5J6 103 aa11.7□□□□□ -0.54
PDLIM2-213ENST00000448520 DAPL1A0PJW8 107 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 C17orf100A8MU93 164 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 VENTXO95231 258 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 FADS2O95864 444 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 LYNP07948 512 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 OR2T7P0C7T2 308 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 LIMS3P0CW19 117 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 LIMS4P0CW20 117 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 PIPP12273 146 aaPredicted RBP11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 EEF1B2P24534 225 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 HTR5AP47898 357 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 PCBD1P61457 104 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 LMO4P61968 165 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 PLP2Q04941 152 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 TP53I3Q53FA7 332 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 OR2G6Q5TZ20 316 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF322Q6U7Q0 402 aaPredicted RBP11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 PAQR4Q8N4S7 273 aaPredicted RBP11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 ACBD7Q8N6N7 88 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF454Q8N9F8 522 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 GJC3Q8NFK1 279 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 OR2T27Q8NH04 317 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 OR1F12Q8NHA8 337 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 SNX33Q8WV41 574 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 TMEM80Q96HE8 168 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 SIGLEC11Q96RL6 698 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 ERVK13-1Q9NX77 482 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 IKZF2Q9UKS7 526 aa11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 DIMT1Q9UNQ2 313 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-213ENST00000448520 IGLV3-9A0A075B6K5 115 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 LOC100509620A0A075B734 347 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 IQCMA0A1B0GVH7 501 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 OR6C6A6NF89 314 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 RP2O75695 350 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 MT-ND5P03915 603 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 CRYBB2P43320 205 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 MAP2K4P45985 399 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 UCP2P55851 309 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 KLF3P57682 345 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 OR12D2P58182 307 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 CSNK2BP67870 215 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 ACTC1P68032 377 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 ACTA1P68133 377 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 TBC1D28Q2M2D7 210 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 RSPO1Q2MKA7 263 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 FAHD2BQ6P2I3 314 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 USP43Q70EL4 1123 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 SYT9Q86SS6 491 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 NAA40Q86UY6 237 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 RNF133Q8WVZ7 376 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 FAHD2AQ96GK7 314 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 OR8B4Q96RC9 309 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 ALG8Q9BVK2 526 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 CCDC90BQ9GZT6 254 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 NARFLQ9H6Q4 476 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 ISG20L2Q9H9L3 353 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 ELOVL3Q9HB03 270 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 MRM2Q9UI43 246 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 LRP12Q9Y561 859 aa11.68□□□□□ -0.54
PDLIM2-213ENST00000448520 IRGMA1A4Y4 181 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF878C9JN71 531 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 WNT9BO14905 357 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 RGS10O43665 173 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 NCR1O76036 304 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 ABHD16AO95870 558 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 CLPTM1O96005 669 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 LCKP06239 509 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 FAM157BP0CG42 384 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 SLC2A1P11166 492 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 CCNOP22674 350 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 DCKP27707 260 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 CFPP27918 469 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 PSMB10P40306 273 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 OPRL1P41146 370 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 PRKXP51817 358 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 TAF13Q15543 124 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 FAM209AQ5JX71 171 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 ZNF684Q5T5D7 378 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 UNQ6126/PRO20091Q6UXV3 157 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 KRT77Q7Z794 578 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 SPRYD4Q8WW59 207 aaPredicted RBP11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 IPCEF1Q8WWN9 437 aaPredicted RBP11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 MYDGFQ969H8 173 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 RAB39BQ96DA2 213 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 C4orf36Q96KX1 117 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 JMJD8Q96S16 334 aa11.67□□□□□ -0.54
PDLIM2-213ENST00000448520 ATF6BQ99941 703 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms