RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 SYNGR4O95473 234 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 HCKP08631 526 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 B4GALT1P15291 398 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 CRYGSP22914 178 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 RCVRNP35243 200 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 MEOX1P50221 254 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 TAS2R19P59542 299 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 PCBD1P61457 104 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 IFITM2Q01629 132 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 SRYQ05066 204 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 FAPQ12884 760 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 CDK10Q15131 360 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 RBMS2Q15434 407 aaKnown RBP17.12■□□□□ 0.33
FAM3A-215ENST00000447601 HYAL4Q2M3T9 481 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 CEACAM16Q2WEN9 425 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 MOGAT2Q3SYC2 334 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 Q6ZSR3 168 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 OR2W3Q7Z3T1 314 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 GALNTL5Q7Z4T8 443 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 OR11H7Q8NGC8 314 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 PP6455Q8WZ26 134 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 NUDT16L1Q9BRJ7 211 aaKnown RBP17.12■□□□□ 0.33
FAM3A-215ENST00000447601 SLC6A15Q9H2J7 730 aa17.12■□□□□ 0.33
FAM3A-215ENST00000447601 ZNF107Q9UII5 783 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-215ENST00000447601 NOSIPQ9Y314 301 aaKnown RBP17.12■□□□□ 0.33
FAM3A-215ENST00000447601 AHCTF1Q8WYP5 2266 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 MEIS3P1A6NDR6 274 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 TMEM14DPA8MWL7 114 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 CDRT15L2A8MXV6 281 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 TNFRSF10AO00220 468 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 RGS13O14921 159 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 SYNGR3O43761 229 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 ANXA3P12429 323 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 CD46P15529 392 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 GSK3AP49840 483 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 MECP2P51608 486 aaKnown RBP17.11■□□□□ 0.33
FAM3A-215ENST00000447601 RRADP55042 308 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 STEAP1BQ6NZ63 245 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 ZNF101Q8IZC7 436 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 TMEM229BQ8NBD8 167 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 OR1F12Q8NHA8 337 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 MED30Q96HR3 178 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 BEX1Q9HBH7 125 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 ITGB1BP2Q9UKP3 347 aa17.11■□□□□ 0.33
FAM3A-215ENST00000447601 MCTS1Q9ULC4 181 aaKnown RBP17.11■□□□□ 0.33
FAM3A-215ENST00000447601 SPAARA0A1B0GVQ0 90 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 C5orf63A6NC05 138 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 ARGFXA6NJG6 315 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 RAB27BO00194 218 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 MRPL33O75394 65 aaKnown RBP17.1■□□□□ 0.33
FAM3A-215ENST00000447601 CD3DP04234 171 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 DBHP09172 617 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 SDHBP21912 280 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 BCL2A1Q16548 175 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 NRN1LQ496H8 165 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 GLIPR1L1Q6UWM5 242 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 GABRG1Q8N1C3 465 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 BEST4Q8NFU0 473 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 AQP3Q92482 292 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 PARPBPQ9NWS1 579 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 ZNF222Q9UK12 451 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 TIMM10BQ9Y5J6 103 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 ALX3O95076 343 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 UBBP0CG47 229 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 SULT1A3P0DMM9 295 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 SULT1A4P0DMN0 295 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 FAM189A2Q15884 450 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 ATP1A1-AS1Q5TC04 95 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 ZNF774Q6NX45 483 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 SLC16A14Q7RTX9 510 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 ZFAND1Q8TCF1 268 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 SPACA5Q96QH8 159 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 GPER1Q99527 375 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 LINC00470Q9BZP3 86 aa17.1■□□□□ 0.33
FAM3A-215ENST00000447601 GPN1Q9HCN4 374 aaPredicted RBP17.1■□□□□ 0.33
FAM3A-215ENST00000447601 OR6C6A6NF89 314 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 FARS2O95363 451 aaKnown RBP17.09■□□□□ 0.33
FAM3A-215ENST00000447601 CYB5AP00167 134 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 IL5P05113 134 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 PRF1P14222 555 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 ZNF32P17041 273 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 SOX8P57073 446 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 PPIAP62937 165 aaKnown RBP17.09■□□□□ 0.33
FAM3A-215ENST00000447601 TNK1Q13470 666 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 TGIF1Q15583 401 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 ZNF260Q3ZCT1 412 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 GLDNQ6ZMI3 551 aaPredicted RBP17.09■□□□□ 0.33
FAM3A-215ENST00000447601 Q6ZTK2 550 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 PNLDC1Q8NA58 520 aaKnown RBP17.09■□□□□ 0.33
FAM3A-215ENST00000447601 OR8S1Q8NH09 359 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 KCNG3Q8TAE7 436 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 SSC4DQ8WTU2 575 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 GINS4Q9BRT9 223 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 CHST5Q9GZS9 411 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 ING4Q9UNL4 249 aa17.09■□□□□ 0.33
FAM3A-215ENST00000447601 TTC28Q96AY4 2481 aa17.08■□□□□ 0.33
FAM3A-215ENST00000447601 NCKAP5O14513 1909 aa17.08■□□□□ 0.33
FAM3A-215ENST00000447601 IGKV1-9A0A0C4DH69 117 aa17.08■□□□□ 0.33
FAM3A-215ENST00000447601 TMEM235A6NFC5 223 aa17.08■□□□□ 0.33
FAM3A-215ENST00000447601 OR6C65A6NJZ3 312 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms