RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PARP8Q8N3A8 854 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 RNF148Q8N7C7 305 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 DTX3Q8N9I9 347 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 CSNK2A3Q8NEV1 391 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 SDR9C7Q8NEX9 313 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 OR52H1Q8NGJ2 320 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 TBC1D15Q8TC07 691 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 NSL1Q96IY1 281 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 TSSK2Q96PF2 358 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 TSSK6Q9BXA6 273 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 PLA2G12AQ9BZM1 189 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 SLITRK2Q9H156 845 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 CENPMQ9NSP4 180 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 NBEAL1Q6ZS30 2694 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 OR6C68A6NDL8 312 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 ZNF878C9JN71 531 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 F5H5P2 479 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 ZNF593O00488 134 aaPredicted RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 CYB5R3P00387 301 aaPredicted RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 HMGN1P05114 100 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 CD80P33681 288 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 GNALP38405 381 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 FXYD6P3P58550 94 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 RPL15P61313 204 aaKnown RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 OR8B8Q15620 311 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 MEP1BQ16820 701 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 TIGD6Q17RP2 521 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 TMEM255AQ5JRV8 349 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 SLC35F1Q5T1Q4 408 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 WDR25Q64LD2 544 aaPredicted RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 KRTAP5-3Q6L8H2 238 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 PGBD2Q6P3X8 592 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 LINC00346Q8IVM7 164 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 CMTM4Q8IZR5 234 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 LNX2Q8N448 690 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 PAPD5Q8NDF8 572 aaKnown RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 BHLHE23Q8NDY6 225 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 OR10AD1Q8NGE0 317 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 OR8S1Q8NH09 359 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 ZNF420Q8TAQ5 688 aaPredicted RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 TEX47Q8TBZ9 253 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 HIST1H2AAQ96QV6 131 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 MICU1Q9BPX6 476 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 ADAT1Q9BUB4 502 aaKnown RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 DGCR6LQ9BY27 220 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 OR10A2Q9H208 303 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 RGCCQ9H4X1 137 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 ZNF696Q9H7X3 374 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 ZNF556Q9HAH1 456 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 RNPEPL1Q9HAU8 725 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 MMP26Q9NRE1 261 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 ZNF69Q9UC07 566 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 ZNF391Q9UJN7 358 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 PRPF19Q9UMS4 504 aaKnown RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 V9GYQ6 96 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 TANC2Q9HCD6 1990 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 B2RBV5 119 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 BHLHE40O14503 412 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 GNGT2O14610 69 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 RGS9O75916 674 aaPredicted RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 SPARCP09486 303 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 MUC1P15941 1255 aaPredicted RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 FUT4P22083 530 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 CA6P23280 308 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 GNGT1P63211 74 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 IL5RAQ01344 420 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 MICAQ29983 383 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 CLEC12AQ5QGZ9 265 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 METTL11BQ5VVY1 283 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 OR2T5Q6IEZ7 315 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 C16orf87Q6PH81 154 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 CFAP77Q6ZQR2 320 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 SLC36A1Q7Z2H8 476 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 PIGWQ7Z7B1 504 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 CYB561A3Q8NBI2 242 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 OR2T29Q8NH02 315 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 NPRL2Q8WTW4 380 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 SLAMF6Q96DU3 332 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 TECTBQ96PL2 329 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 MMADHCQ9H3L0 296 aaPredicted RBP6.5□□□□□ -1.37
CD44-211ENST00000442151 NIPAL2Q9H841 368 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 BEX1Q9HBH7 125 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 POMT1Q9Y6A1 747 aa6.5□□□□□ -1.37
CD44-211ENST00000442151 hCG_1807616A0A1W2PRN6 198 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 OOEPA6NGQ2 149 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 A6NLC8 198 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 ANXA2P2A6NMY6 339 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 ZNF879B4DU55 563 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 H0YL77 283 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 DCTN6O00399 190 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 MLNRO43193 412 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 ADAM20O43506 726 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 FAM20BO75063 409 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 TOX4O94842 621 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 PTBP3O95758 552 aaKnown RBP6.49□□□□□ -1.37
CD44-211ENST00000442151 GASTP01350 101 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 OTX1P32242 354 aaPredicted RBP6.49□□□□□ -1.37
CD44-211ENST00000442151 PYCR1P32322 319 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 ACTR3P61158 418 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms