RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SLCO5A1Q9H2Y9 848 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 GLTPQ9NZD2 209 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 FLVCR2Q9UPI3 526 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.49□□□□□ -1.373e-11■■■□□ 16.9
CDC42BPA-208ENST00000442054 ZIC3O60481 467 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 MT-ND4P03905 459 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 CDKN2AP42771 156 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 DAP3P51398 398 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 TP53I3Q53FA7 332 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 GLDNQ6ZMI3 551 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 CDC20BQ86Y33 519 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR6K6Q8NGW6 343 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ITLN2Q8WWU7 325 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC25A28Q96A46 364 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ORAI1Q96D31 301 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 PERPQ96FX8 193 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 PLPPR2Q96GM1 343 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 DPAGT1Q9H3H5 408 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 C1orf198Q9H425 327 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 FRRS1LQ9P0K9 344 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 MRM2Q9UI43 246 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADAM18Q9Y3Q7 739 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 TRAV6A0A075B6T7 132 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A1B0GVI7 797 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 MFSD2BA6NFX1 497 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 LRRN3E7EW58 273 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 GABARAPH6UMI1 98 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 J3QLW9 94 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 DCTN6O00399 190 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 OIP5O43482 229 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SELENOFO60613 162 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF19P17023 458 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 GDNFP39905 211 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC25A1P53007 311 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 GFOD2Q3B7J2 385 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 FDX2Q6P4F2 183 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 DPY19L2P2Q6ZN68 376 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC35D2Q76EJ3 337 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 PDCD1LG2Q9BQ51 273 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 USB1Q9BQ65 265 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 RABL2AQ9UBK7 228 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 MGAT4CQ9UBM8 478 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 KCNN3Q9UGI6 736 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 SCP2D1Q9UJQ7 156 aa6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 KLF2Q9Y5W3 355 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-208ENST00000442054 TMEM272A0A1B0GTI8 110 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRSS47A8MTI9 375 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 FTCDNL1E5RQL4 147 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 VSIG10L2P0DP72 767 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ANXA3P12429 323 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF708P17019 499 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 SRSF4Q08170 494 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 LGALS3BPQ08380 585 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 FOXF2Q12947 444 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 P2RY6Q15077 328 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF626Q68DY1 528 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADAM5Q6NVV9 412 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ATG4DQ86TL0 474 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC35F2Q8IXU6 374 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRSS35Q8N3Z0 413 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 LRRC18Q8N456 261 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR52I2Q8NH67 350 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 GCDHQ92947 438 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 CCL19Q99731 98 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 SRA1Q9HD15 236 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 NOX4Q9NPH5 578 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 DIABLOQ9NR28 239 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF346Q9UL40 294 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PCDHB10Q9UN67 800 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 B3GALT5Q9Y2C3 310 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 AKAP13Q12802 2813 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 CADP27708 2225 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PRRC2CQ9Y520 2896 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 WIPF3A6NGB9 483 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 RIIAD1A6NNX1 92 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF879B4DU55 563 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PYCR1P32322 319 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 SUCLG1P53597 346 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 MELKQ14680 651 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 AANATQ16613 207 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 CEACAM16Q2WEN9 425 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 RGS7BPQ6MZT1 257 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PEG10Q86TG7 708 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 CXorf67Q86X51 503 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADGRG3Q86Y34 549 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 HAVCR1Q96D42 359 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZMYND19Q96E35 227 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 CACNG6Q9BXT2 260 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 RTN4RQ9BZR6 473 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 BRD7Q9NPI1 651 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ELOVL5Q9NYP7 299 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZMAT5Q9UDW3 170 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 FKBP7Q9Y680 259 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PHF3Q92576 2039 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 DMXL1Q9Y485 3027 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ABCD4O14678 606 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 SULT1B1O43704 296 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 GPRIN2O60269 458 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 IL5P05113 134 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms