RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CD37P11049 281 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 RCVRNP35243 200 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 GDNFP39905 211 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 PER3P56645 1201 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 PSG4Q00888 419 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 NHLH1Q02575 133 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 SNTB2Q13425 540 aaKnown RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 GPR176Q14439 515 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 C3AR1Q16581 482 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 RTL6Q6ICC9 239 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 MRPL21Q7Z2W9 205 aaKnown RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 CSNK2A3Q8NEV1 391 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 STEAP2Q8NFT2 490 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 OR6K3Q8NGY3 331 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 APOBEC3DQ96AK3 386 aaPredicted RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 CREB3L1Q96BA8 519 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 ADAT3Q96EY9 351 aaPredicted RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 HIST1H2AAQ96QV6 131 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 ABHD1Q96SE0 405 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 FBLN5Q9UBX5 448 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 KCNN3Q9UGI6 736 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 KLK13Q9UKR3 277 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 PIGLQ9Y2B2 252 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 EML6Q6ZMW3 1958 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 TMEM272A0A1B0GTI8 110 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 FIGNL2A6NMB9 653 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 IGHV3-9P01782 118 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 ATP1B3P54709 279 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 DGCR2P98153 550 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 KRTCAP3Q53RY4 240 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CLVS2Q5SYC1 327 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 AGAP6Q5VW22 663 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 FAM166AQ6J272 317 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 Q6ZS92 163 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 IZUMO1Q8IYV9 350 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 DTX3Q8N9I9 347 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CHST4Q8NCG5 386 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 DUSP18Q8NEJ0 188 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 YIPF5Q969M3 257 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 DACT3Q96B18 629 aaPredicted RBP5.27□□□□□ -1.57
VPS50-205ENST00000441602 NUDT16L1Q9BRJ7 211 aaKnown RBP5.27□□□□□ -1.57
VPS50-205ENST00000441602 CHST5Q9GZS9 411 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 C12orf49Q9H741 205 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CDH20Q9HBT6 801 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CLCF1Q9UBD9 225 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 EIF3KQ9UBQ5 218 aaKnown RBP5.27□□□□□ -1.57
VPS50-205ENST00000441602 A6NIN4 97 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 H3BUI4 141 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 J3QW42 95 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 PLA2G10O15496 165 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CTAG2O75638 210 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 PMPCAQ10713 525 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 RNFT1Q5M7Z0 435 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 LHFPL2Q6ZUX7 228 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 FAM214BQ7L5A3 538 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 NUFIP2Q7Z417 695 aaKnown RBP5.27□□□□□ -1.57
VPS50-205ENST00000441602 OR56B1Q8NGI3 324 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 OR51A2Q8NGJ7 313 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 OR1K1Q8NGR3 316 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 TRIM63Q969Q1 353 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 BORCS8Q96FH0 119 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CACNG6Q9BXT2 260 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 ZNF107Q9UII5 783 aaPredicted RBP5.27□□□□□ -1.57
VPS50-205ENST00000441602 MSRB2Q9Y3D2 182 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 A0A087WV48 116 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 ZNF816-ZNF321PA0A0X1KG74 233 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 WDR1O75083 606 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CYB5AP00167 134 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 SPNP16150 400 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 ABOP16442 354 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CBX5P45973 191 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 TBC1D28Q2M2D7 210 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 C9orf135Q5VTT2 229 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 GLIPR1L1Q6UWM5 242 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 Q6ZSR3 168 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 ANGPTL5Q86XS5 388 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 SIAH3Q8IW03 269 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 OR52I2Q8NH67 350 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 UBASH3BQ8TF42 649 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 CHAC2Q8WUX2 184 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 TNFAIP8L1Q8WVP5 186 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 ZNF837Q96EG3 531 aaPredicted RBP5.27□□□□□ -1.57
VPS50-205ENST00000441602 ELL3Q9HB65 397 aaPredicted RBP5.27□□□□□ -1.57
VPS50-205ENST00000441602 NLKQ9UBE8 527 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 ING4Q9UNL4 249 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 PROCRQ9UNN8 238 aa5.27□□□□□ -1.57
VPS50-205ENST00000441602 HMX3A6NHT5 357 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 PRAF2O60831 178 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 ZNF780AO75290 641 aaPredicted RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 MPIG6BO95866 241 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 IGLV3-1P01715 115 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 CSTBP04080 98 aaKnown RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 LPLP06858 475 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 MMP7P09237 267 aaPredicted RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 AKAIN1P0CW23 69 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 RFX2P48378 723 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 RAG2P55895 527 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 TAS2R19P59542 299 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 RAB1AP62820 205 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 GSG1Q2KHT4 349 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms