RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MAS1P04201 325 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CST2P09228 141 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SNRPBP14678 240 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 FSTP19883 344 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 EVX1P49640 407 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SCRN3Q0VDG4 424 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ZNF79Q15937 498 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 TRIQKQ629K1 86 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 BAIAP2L2Q6UXY1 529 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 Q6ZNX1 250 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 LRRTM1Q86UE6 522 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 DMRTC2Q8IXT2 367 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ZNF100Q8IYN0 542 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 LRRC18Q8N456 261 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 LINC01560Q8TB33 94 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 LGALS14Q8TCE9 139 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 KCNJ15Q99712 375 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 FOXB1Q99853 325 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 LINC00470Q9BZP3 86 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 GPR35Q9HC97 309 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 DDX28Q9NUL7 540 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 TMEM38BQ9NVV0 291 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 NUFIP1Q9UHK0 495 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PRR14LQ5THK1 2151 aa12.69□□□□□ -0.38
TNFRSF1A-204ENST00000440083 POLQO75417 2590 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 DCHS2Q6V1P9 2916 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 FARS2O95363 451 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PTTG1O95997 202 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PAHP00439 452 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 EIF4EP06730 217 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 IL7P13232 177 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ELK1P19419 428 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 INPP1P49441 399 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ZNF121P58317 390 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 MADCAM1Q13477 382 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 RAB35Q15286 201 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CEACAM16Q2WEN9 425 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 UBE2NLQ5JXB2 153 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ELFN2Q5R3F8 820 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 FAM27BQ5VT28 67 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ELMOD2Q8IZ81 293 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 GABRG1Q8N1C3 465 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SETD6Q8TBK2 473 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SPTSSAQ969W0 71 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PPP1R14AQ96A00 147 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 APH1AQ96BI3 265 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PGAM5Q96HS1 289 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SPOCK3Q9BQ16 436 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 HDHD2Q9H0R4 259 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ZCCHC4Q9H5U6 513 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PNRC2Q9NPJ4 139 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CYSLTR2Q9NS75 346 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 C14orf119Q9NWQ9 140 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PLEK2Q9NYT0 353 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 TAS2R4Q9NYW5 299 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CRIM1Q9NZV1 1036 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 FOXJ3Q9UPW0 622 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 N6AMT1Q9Y5N5 214 aa12.68□□□□□ -0.38
TNFRSF1A-204ENST00000440083 TRAV8-7A0A075B6U6 113 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CYSRT1A8MQ03 144 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ZNF587BE7ETH6 402 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SYT7O43581 403 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 DOK2O60496 412 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 TTRP02766 147 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ACSM4P0C7M7 580 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CALCBP10092 127 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PRF1P14222 555 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 B4GALT1P15291 398 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ZNF20P17024 532 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 FOXG1P55316 489 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 PCBD1P61457 104 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SCN1BQ07699 218 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 OXA1LQ15070 435 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 STK11Q15831 433 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 GLT8D1Q68CQ7 371 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 FAM57BQ71RH2 274 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 OR4M1Q8NGD0 313 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 LRRC46Q96FV0 321 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 CMTM3Q96MX0 182 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SDHCQ99643 169 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 GFI1Q99684 422 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SP140LQ9H930 580 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 UPB1Q9UBR1 384 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ETV7Q9Y603 341 aa12.67□□□□□ -0.38
TNFRSF1A-204ENST00000440083 FBN2P35556 2912 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 HRNRQ86YZ3 2850 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 A0A0B4J203 849 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 MEGF11A6BM72 1044 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SGCEO43556 437 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 GNALP38405 381 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 KIR2DL3P43628 341 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SLC6A9P48067 706 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 HIST1H3AP68431 136 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 SORDQ00796 357 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 GALK2Q01415 458 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 ECH1Q13011 328 aa12.66□□□□□ -0.38
TNFRSF1A-204ENST00000440083 RAB11BQ15907 218 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms