RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SPOCK1Q08629 439 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 BLMHQ13867 455 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 GK2Q14410 553 aaPredicted RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 SSX1Q16384 188 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 MOGQ16653 247 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 RGS7BPQ6MZT1 257 aaPredicted RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 PAMR1Q6UXH9 720 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 GDPGP1Q6ZNW5 385 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 PGAP1Q75T13 922 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 KRT74Q7RTS7 529 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 GPR141Q7Z602 305 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 COMMD2Q86X83 199 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 FTMTQ8N4E7 242 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 ZFP41Q8N8Y5 198 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 CSNK2A3Q8NEV1 391 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 SLC25A40Q8TBP6 338 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 KLF14Q8TD94 323 aaPredicted RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 TMEM171Q8WVE6 324 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 HAVCR1Q96D42 359 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 PIK3IP1Q96FE7 263 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 PDCD1LG2Q9BQ51 273 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 CA10Q9NS85 328 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 CGGBP1Q9UFW8 167 aaPredicted RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 FBXO9Q9UK97 447 aaPredicted RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 SF3B6Q9Y3B4 125 aaKnown RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 CMAHPQ9Y471 501 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 N6AMT1Q9Y5N5 214 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 V9GYS6 101 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 ANKHD1Q8IWZ3 2542 aaKnown RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 C5orf63A6NC05 138 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 P2RY10O00398 339 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 SC5DO75845 299 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 RGS9O75916 674 aaPredicted RBP10.9□□□□□ -0.66
SCLT1-202ENST00000439369 RAF1P04049 648 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 CD2P06729 351 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 CD36P16671 472 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 KITLGP21583 273 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 GCH1P30793 250 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 TGFBR2P37173 567 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 GSK3AP49840 483 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 RPS11P62280 158 aaKnown RBP eCLIP10.9□□□□□ -0.66
SCLT1-202ENST00000439369 FAM3AP98173 230 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 Q499Y3 187 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF672Q499Z4 452 aaPredicted RBP10.9□□□□□ -0.66
SCLT1-202ENST00000439369 OR14K1Q8NGZ2 314 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 OR2AE1Q8NHA4 323 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 RGP1Q92546 391 aaPredicted RBP10.9□□□□□ -0.66
SCLT1-202ENST00000439369 PPP1R14AQ96A00 147 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 LYZL4Q96KX0 146 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 PSMG3-AS1Q96PY0 264 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 OR2J1Q9GZK6 312 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 PTTG3PQ9NZH4 202 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 POU2F3Q9UKI9 436 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 ATP23Q9Y6H3 246 aa10.9□□□□□ -0.66
SCLT1-202ENST00000439369 USP9XQ93008 2570 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-202ENST00000439369 IGLV3-9A0A075B6K5 115 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 PNMA8CA0A1B0GUJ8 204 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 TRDV1A0A1B0GX56 115 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 IQCF6A8MYZ5 107 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 ZNF879B4DU55 563 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 IGHV3-13P01766 116 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 ANOS1P23352 680 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 FGF9P31371 208 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-202ENST00000439369 THBS4P35443 961 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 KLF3P57682 345 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-202ENST00000439369 RIPPLY1Q0D2K3 151 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 EFNB3Q15768 340 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 GFOD2Q3B7J2 385 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 SP5Q6BEB4 398 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-202ENST00000439369 UNQ9370/PRO34162Q6UXP9 181 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 PARP16Q8N5Y8 322 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 SEMA6DQ8NFY4 1073 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 KBTBD8Q8NFY9 601 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 OR13C3Q8NGS6 347 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 SYNPRQ8TBG9 265 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 PP6455Q8WZ26 134 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 MRPL24Q96A35 216 aaKnown RBP10.89□□□□□ -0.67
SCLT1-202ENST00000439369 FAM71F1Q96KD3 344 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-202ENST00000439369 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 DHRS9Q9BPW9 319 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 BCL7BQ9BQE9 202 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 TMED9Q9BVK6 235 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 SLC22A4Q9H015 551 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 OR51B6Q9H340 312 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 POFUT1Q9H488 388 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 PLEKHA1Q9HB21 404 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 ABCB9Q9NP78 766 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 ZNF275Q9NSD4 429 aaPredicted RBP10.89□□□□□ -0.67
SCLT1-202ENST00000439369 GPR160Q9UJ42 338 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 STUB1Q9UNE7 303 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 DHDHQ9UQ10 334 aa10.89□□□□□ -0.67
SCLT1-202ENST00000439369 NOP16Q9Y3C1 178 aaKnown RBP10.89□□□□□ -0.67
SCLT1-202ENST00000439369 SPTBN1Q01082 2364 aaKnown RBP10.88□□□□□ -0.67
SCLT1-202ENST00000439369 TRBV5-7A0A0A0MS05 114 aa10.88□□□□□ -0.67
SCLT1-202ENST00000439369 ZNF816-ZNF321PA0A0X1KG74 233 aa10.88□□□□□ -0.67
SCLT1-202ENST00000439369 A0A1B0GWJ7 208 aa10.88□□□□□ -0.67
SCLT1-202ENST00000439369 A1L4Q6 167 aa10.88□□□□□ -0.67
SCLT1-202ENST00000439369 GGT3PA6NGU5 568 aa10.88□□□□□ -0.67
SCLT1-202ENST00000439369 CD300LBA8K4G0 201 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms