RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 COX15Q7KZN9 410 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 TMPRSS9Q7Z410 1059 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 BPIFCQ8NFQ6 507 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 OR13C9Q8NGT0 318 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 THAP6Q8TBB0 222 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 MBD2Q9UBB5 411 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 ANAPC10Q9UM13 185 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 KCNK7Q9Y2U2 307 aa14.54□□□□□ -0.08
CLCNKA-203ENST00000439316 DBX1A6NMT0 343 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 MPTX1A8MV57 137 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 FAM25EA8MYX2 175 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 ETV2O00321 342 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 ERCC1P07992 297 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 BIDP55957 195 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 ZNF574Q6ZN55 896 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 RHOUQ7L0Q8 258 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 HOGA1Q86XE5 327 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 OR5D14Q8NGL3 314 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 LRRC46Q96FV0 321 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 ARPC5LQ9BPX5 153 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 FAM117AQ9C073 453 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 SELENOIQ9C0D9 397 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 ARRDC1-AS1Q9H2J1 176 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 SERINC1Q9NRX5 453 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 B3GAT1Q9P2W7 334 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 VDAC3Q9Y277 283 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 B3GALT5Q9Y2C3 310 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 ADAMTS20P59510 1910 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 A0A1W2PQM1 296 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 VAMP1P23763 118 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 FOXL2P58012 376 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 TAS2R31P59538 309 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 CCL7P80098 99 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 INPP5JQ15735 1006 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 AWAT2Q6E213 333 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 TCEAL6Q6IPX3 200 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 TMEM71Q6P5X7 295 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 SHISA6Q6ZSJ9 500 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 RTN4RL2Q86UN3 420 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 APCDD1LQ8NCL9 501 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 CASTOR1Q8WTX7 329 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 RNF138Q8WVD3 245 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 TCEAL3Q969E4 200 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 ZNF501Q96CX3 271 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 EMC6Q9BV81 110 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 MRPL13Q9BYD1 178 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 PIGMQ9H3S5 423 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 MOB1AQ9H8S9 216 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 SLC22A11Q9NSA0 550 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 HRH3Q9Y5N1 445 aa14.53□□□□□ -0.08
CLCNKA-203ENST00000439316 TSPAN9O75954 239 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 CRHP06850 196 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 LAP3P28838 519 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 MPLP40238 635 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 MC2RQ01718 297 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 UQCC3Q6UW78 93 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 CCDC36Q8IYA8 594 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 INO80EQ8NBZ0 244 aaPredicted RBP14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 STOML3Q8TAV4 291 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 LPAR5Q9H1C0 372 aa14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 PHF3Q92576 2039 aaKnown RBP14.52□□□□□ -0.09
CLCNKA-203ENST00000439316 TRBV6-7A0A0A0MS04 114 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 A0A0A6YYD4 124 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 VSTM2BA6NLU5 285 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 F5H0A9 414 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 SIGLEC5O15389 551 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 PMP2P02689 132 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 IFNA6P05013 189 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 CHRM2P08172 466 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 AKR1C4P17516 323 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 NAT1P18440 290 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF93P35789 620 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 EMP2P54851 167 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 FOXK1P85037 733 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 KCTD9Q7L273 389 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 ANGPTL5Q86XS5 388 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 OR5AS1Q8N127 324 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 NFAM1Q8NET5 270 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM185AQ8NFB2 350 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 OR51E1Q8TCB6 317 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 PMEPA1Q969W9 287 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 C1orf147Q96MC9 270 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 NICN1Q9BSH3 213 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 TGIF2Q9GZN2 237 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF768Q9H5H4 540 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 FGF21Q9NSA1 209 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 RPH3AQ9Y2J0 694 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 LHFPL6Q9Y693 200 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 KMT2EQ8IZD2 1858 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 SHISA8B8ZZ34 492 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 EEF1E1-BLOC1S5C9J1V9 151 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 F8VVB4 439 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 F8VWA3 439 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 EFNA2O43921 213 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 GSTP1P09211 210 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF20P17024 532 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 PSMB6P28072 239 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 THEM4Q5T1C6 240 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 RNF144BQ7Z419 303 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 KMT5CQ86Y97 462 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms