RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ZNF331Q9NQX6 463 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 IL37Q9NZH6 218 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 C6orf203Q9P0P8 240 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF225Q9UK10 706 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 NCOA6Q14686 2063 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 TENM1Q9UKZ4 2725 aa2.14□□□□□ -2.07
HMGB3P12-201ENST00000438745 INTS1Q8N201 2190 aaKnown RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 BTBD17A6NE02 478 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 HSD17B6O14756 317 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 TOX3O15405 576 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 CDC40O60508 579 aaKnown RBP eCLIP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 HOXC4P09017 264 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF30P17039 623 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 RCC1P18754 421 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 MDKP21741 143 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 RPS24P62847 133 aaKnown RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 REG3AQ06141 175 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR5I1Q13606 314 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 KLHL38Q2WGJ6 581 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 MAJINQ3KP22 176 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 KCTD16Q68DU8 428 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 CYB5R2Q6BCY4 276 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 FAM92BQ6ZTR7 304 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 UTS2BQ765I0 119 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF546Q86UE3 836 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 THOC6Q86W42 341 aaKnown RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 EIF1ADQ8N9N8 165 aaKnown RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR8J1Q8NGP2 316 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR1L4Q8NGR5 311 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 LINC01560Q8TB33 94 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 FAM57AQ8TBR7 257 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 SLC37A2Q8TED4 501 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 IL22RA2Q969J5 263 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 COQ2Q96H96 371 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 ANKRD36BP1Q96IX9 119 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 ITCHQ96J02 903 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF514Q96K75 400 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF641Q96N77 438 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 FMO2Q99518 471 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 HDHD3Q9BSH5 251 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 TRIM62Q9BVG3 475 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 FANCEQ9HB96 536 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 QPCTLQ9NXS2 382 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 GNPTGQ9UJJ9 305 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF223Q9UK11 482 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 PHF3Q92576 2039 aaKnown RBP2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 SEC16AO15027 2179 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 UBR4Q5T4S7 5183 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 USF3Q68DE3 2245 aa2.13□□□□□ -2.07
HMGB3P12-201ENST00000438745 MYH10P35580 1976 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 PRKDCP78527 4128 aaKnown RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 LCE6AA0A183 80 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 PCP4L1A6NKN8 68 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 C3orf84H3BNL1 204 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 FOXE1O00358 373 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 SCAMP2O15127 329 aaKnown RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 NBR2O15453 112 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 RIPK2O43353 540 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 TIMM8AO60220 97 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 CA11O75493 328 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 TNNC2P02585 160 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 FOLR1P15328 257 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF24P17028 368 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 NELFEP18615 380 aaKnown RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 IL12AP29459 219 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 CCR6P51684 374 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 DLX1P56177 255 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 SEC61GP60059 68 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 YWHAGP61981 247 aaKnown RBP eCLIP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 ACVR1Q04771 509 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 TMEM249Q2WGJ8 235 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 CTRB2Q6GPI1 263 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR2A2Q6IF42 318 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 LCN12Q6JVE5 192 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 C1orf94Q6P1W5 598 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 WDR59Q6PJI9 974 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 ENPP6Q6UWR7 440 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 SCD5Q86SK9 330 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF679Q8IYX0 411 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 BLIDQ8IZY5 108 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZCCHC7Q8N3Z6 543 aaKnown RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 RPRMLQ8N4K4 120 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 FNDC5Q8NAU1 212 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 BHLHE23Q8NDY6 225 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 TMEM161BQ8NDZ6 487 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 CCDC54Q8NEL0 328 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 SLC2A14Q8TDB8 520 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 ZNF418Q8TF45 676 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 RNASE6Q93091 150 aaKnown RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 SLC41A3Q96GZ6 507 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 SLC35E1Q96K37 410 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 FCRL1Q96LA6 429 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR2M2Q96R28 347 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 PANX2Q96RD6 677 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 NRIP2Q9BQI9 281 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 PELOQ9BRX2 385 aaKnown RBP2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 PARD6BQ9BYG5 372 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 OR11A1Q9GZK7 315 aa2.12□□□□□ -2.07
HMGB3P12-201ENST00000438745 GBA3Q9H227 469 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms