RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TMEM255BQ8WV15 326 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 GCGP01275 180 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 PLP1P60201 277 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 HLA-DRB3P79483 266 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 GPNMBQ14956 572 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 NR0B2Q15466 257 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 ARL6IP6Q8N6S5 226 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 RHBDD1Q8TEB9 315 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 LCORQ96JN0 433 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 OR51B6Q9H340 312 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 SLAMF8Q9P0V8 285 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF835Q9Y2P0 537 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 LOC107986453A0A1B0GWG9 222 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 GFRA2O00451 464 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF737O75373 536 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 NDUFB6O95139 128 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 UTS2O95399 124 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 IL21Q9HBE4 155 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 CHST2Q9Y4C5 530 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 A0A1B0GWA3 101 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 XRCC2O43543 280 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 DOK2O60496 412 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 HOXC5Q00444 222 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 LTC4SQ16873 150 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 DOLPP1Q86YN1 238 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 TMEM251Q8N6I4 163 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 OR5D18Q8NGL1 313 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 STARD4Q96DR4 205 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 NEURL2Q9BR09 285 aa10.51□□□□□ -0.73
PTCH1-209ENST00000437951 ZMAT3Q9HA38 289 aaKnown RBP10.51□□□□□ -0.73
PTCH1-209ENST00000437951 VAMP5O95183 116 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 ARR3P36575 388 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 ERVS71-1P61550 626 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 FAM24BQ8N5W8 94 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 OR10X1Q8NGY0 326 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 C19orf43Q9BQ61 176 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 UBE2L5PA0A1B0GUS4 154 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 SLC35G1Q2M3R5 365 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 OR52E1Q8NGJ3 308 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 CSF3RQ99062 836 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 ZFP30Q9Y2G7 519 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 R4GMQ9 66 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 SLC16A13Q7RTY0 426 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 BVESQ8NE79 360 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 GPX7Q96SL4 187 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-209ENST00000437951 PPP1R3CQ9UQK1 317 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 A0A087WV62 115 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 DRGXA6NNA5 263 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 LEUTXA8MZ59 168 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 H3BVH4 76 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 PRDX1Q06830 199 aaKnown RBP10.5□□□□□ -0.73
PTCH1-209ENST00000437951 TRAV34A0A0B4J273 112 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 SSR4P51571 173 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 OR1L1Q8NH94 360 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 PRRX2Q99811 253 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 CYSLTR2Q9NS75 346 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 RGPD1P0DJD0 1748 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 RHOBP62745 196 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 HTRA3P83110 453 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 FAM3AP98173 230 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 HES1Q14469 280 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 LYSMD4Q5XG99 296 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 SCGB1D4Q6XE38 83 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 IL22RA2Q969J5 263 aa10.5□□□□□ -0.73
PTCH1-209ENST00000437951 LINC00862A6NCI5 91 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 SEMA4FO95754 770 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 TMEM176BQ3YBM2 270 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-209ENST00000437951 TBPL2Q6SJ96 375 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 ZNF480Q8WV37 535 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 IGSF21Q96ID5 467 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 EPHX3Q9H6B9 360 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 LYRM4Q9HD34 91 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 RBFOX3A6NFN3 312 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 PGA4P0DJD7 388 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 PGA5P0DJD9 388 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 SUCLG1P53597 346 aaKnown RBP10.49□□□□□ -0.73
PTCH1-209ENST00000437951 OR2J1Q9GZK6 312 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 UQCC1Q9NVA1 299 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 PDE6DO43924 150 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 SLC35E2P0CK97 266 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 S100A4P26447 101 aaKnown RBP10.49□□□□□ -0.73
PTCH1-209ENST00000437951 HLA-DRB5Q30154 266 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 NUP98P52948 1817 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 TNFRSF10CO14798 259 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 PIAS2O75928 621 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 NEURL1O76050 574 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 CD3DP04234 171 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 HIST1H1BP16401 226 aaKnown RBP10.49□□□□□ -0.73
PTCH1-209ENST00000437951 FAM3BP58499 235 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-209ENST00000437951 INPP5JQ15735 1006 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-209ENST00000437951 APOOQ9BUR5 198 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 FAM206AQ9NX38 181 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 CDC42EP3Q9UKI2 254 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 ANKRD36CQ5JPF3 1778 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 GYPAP02724 150 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 INHBBP09529 407 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 CD96P40200 585 aa10.49□□□□□ -0.73
PTCH1-209ENST00000437951 DIO1P49895 249 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms