RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 SELEP16581 610 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 WNT5AP41221 380 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 CLRN1P58418 232 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 RPL27P61353 136 aaKnown RBP11.79□□□□□ -0.52
LINC01088-201ENST00000437737 EFNB1P98172 346 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 CD47Q08722 323 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 CDK5R2Q13319 367 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 HLXQ14774 488 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-201ENST00000437737 PDCD1Q15116 288 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 ZMYND11Q15326 602 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 NRN1LQ496H8 165 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 C6orf141Q5SZD1 244 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 ADCK1Q86TW2 530 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 LRRC28Q86X40 367 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-201ENST00000437737 TCEANCQ8N8B7 351 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 OR10S1Q8NGN2 331 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 FAM110DQ8TAY7 271 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-201ENST00000437737 FNDC8Q8TC99 324 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 HDAC2Q92769 488 aaKnown RBP11.79□□□□□ -0.52
LINC01088-201ENST00000437737 SSBP3Q9BWW4 388 aaPredicted RBP11.79□□□□□ -0.52
LINC01088-201ENST00000437737 CHIAQ9BZP6 476 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 MYRFQ9Y2G1 1151 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 TPRKBQ9Y3C4 175 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
LINC01088-201ENST00000437737 PRR23D1E9PI22 279 aaPredicted RBP11.78□□□□□ -0.52
LINC01088-201ENST00000437737 TIMM8AO60220 97 aaPredicted RBP11.78□□□□□ -0.52
LINC01088-201ENST00000437737 RENP00797 406 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 MMP7P09237 267 aaPredicted RBP11.78□□□□□ -0.52
LINC01088-201ENST00000437737 PGA4P0DJD7 388 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 PGA3P0DJD8 388 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 PRR23D2P0DMB1 279 aaPredicted RBP11.78□□□□□ -0.52
LINC01088-201ENST00000437737 TNFRSF1AP19438 455 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 TNFSF4P23510 183 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 GDI2P50395 445 aaKnown RBP11.78□□□□□ -0.52
LINC01088-201ENST00000437737 ERVK-25P63136 954 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 TMED1Q13445 227 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 SLC35F1Q5T1Q4 408 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 RFPL4BQ6ZWI9 263 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 FAM122BQ7Z309 247 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 IGFN1Q86VF2 1251 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 GID4Q8IVV7 300 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
LINC01088-201ENST00000437737 ZNF283Q8N7M2 679 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 ABHD4Q8TB40 342 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 MCHR2Q969V1 340 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 IL4I1Q96RQ9 567 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 TCF7L1Q9HCS4 588 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 PLCXD1Q9NUJ7 323 aa11.78□□□□□ -0.52
LINC01088-201ENST00000437737 IGHV2-70DA0A0C4DH43 119 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 IRGMA1A4Y4 181 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 MAGEA13PA6NCF6 341 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 CEACAM18A8MTB9 384 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 CENPBD1B2RD01 187 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 PIN1P1O15428 100 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 PRKYO43930 277 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 IGHG1P01857 330 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 RPS2P15880 293 aaKnown RBP11.77□□□□□ -0.53
LINC01088-201ENST00000437737 HIST1H1CP16403 213 aaKnown RBP11.77□□□□□ -0.53
LINC01088-201ENST00000437737 GABRB1P18505 474 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 MDH2P40926 338 aaKnown RBP11.77□□□□□ -0.53
LINC01088-201ENST00000437737 CENPAP49450 140 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 PPP1CBP62140 327 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 GNB2P62879 340 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01088-201ENST00000437737 ARMC4Q5T2S8 1044 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 NXNL2Q5VZ03 156 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 Q6YL49 198 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 C1orf174Q8IYL3 243 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 POM121L2Q96KW2 1035 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 PRDM13Q9H4Q3 707 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 NOX4Q9NPH5 578 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 ASH2LQ9UBL3 628 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01088-201ENST00000437737 ADAM18Q9Y3Q7 739 aa11.77□□□□□ -0.53
LINC01088-201ENST00000437737 RPL36Q9Y3U8 105 aaKnown RBP11.77□□□□□ -0.53
LINC01088-201ENST00000437737 KMT2CQ8NEZ4 4911 aaKnown RBP11.77□□□□□ -0.53
LINC01088-201ENST00000437737 NBEAL2Q6ZNJ1 2754 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 TEX13CA0A0J9YWL9 993 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 PRODHO43272 600 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 MRPS14O60783 128 aaKnown RBP11.76□□□□□ -0.53
LINC01088-201ENST00000437737 WNT2P09544 360 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 ZNF32P17041 273 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 KRR1Q13601 381 aaKnown RBP11.76□□□□□ -0.53
LINC01088-201ENST00000437737 GPR157Q5UAW9 335 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 TMEM86BQ8N661 226 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 BPIFB6Q8NFQ5 453 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 OR2Z1Q8NG97 314 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 AKR7LQ8NHP1 331 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 CNIH3Q8TBE1 160 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 RAB40AQ8WXH6 277 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 Q96M85 177 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 SIGLEC11Q96RL6 698 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 PPP1R3CQ9UQK1 317 aa11.76□□□□□ -0.53
LINC01088-201ENST00000437737 LOC100509620A0A075B734 347 aa11.75□□□□□ -0.53
LINC01088-201ENST00000437737 EFCAB10A6NFE3 127 aa11.75□□□□□ -0.53
LINC01088-201ENST00000437737 H3BSA7 217 aa11.75□□□□□ -0.53
LINC01088-201ENST00000437737 WBP4O75554 376 aaKnown RBP11.75□□□□□ -0.53
LINC01088-201ENST00000437737 CLPXO76031 633 aa11.75□□□□□ -0.53
LINC01088-201ENST00000437737 MELTFP08582 738 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms