RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ACTR6Q9GZN1 396 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 PBOV1Q9GZY1 135 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 OBP2BQ9NPH6 170 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 NDUFA13Q9P0J0 144 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 ATPIF1Q9UII2 106 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 ENPP5Q9UJA9 477 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 OR52A1Q9UKL2 312 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 AMDHD2Q9Y303 409 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 PKD1L2Q7Z442 2459 aa6.09□□□□□ -1.43
LSM3P3-201ENST00000436601 ATMQ13315 3056 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 CNTRLQ7Z7A1 2325 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 A0A1B0GTI1 187 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 IQCMA0A1B0GVH7 501 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 TRDV1A0A1B0GX56 115 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 C5orf49A4QMS7 147 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 NKX2-6A6NCS4 301 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ACOD1A6NK06 481 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 TMEM212A6NML5 194 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 M0R135 149 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 AIREO43918 545 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 GPRIN2O60269 458 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 PSPNO60542 156 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 SC5DO75845 299 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 IGKV3-15P01624 115 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 IGLV1-44P01699 117 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ISG15P05161 165 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 RAC2P15153 192 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 PSMA1P25786 263 aaKnown RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 TGFBR1P36897 503 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 GDNFP39905 211 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 MAGEB1P43366 347 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ASCL1P50553 236 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 IDH3GP51553 393 aaPredicted RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 TPTEP56180 551 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 LGALS4P56470 323 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 PLP2Q04941 152 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 TAB1Q15750 504 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ODF4Q2M2E3 257 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 SNAI3Q3KNW1 292 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 BCL2L15Q5TBC7 163 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 MTFR2Q6P444 385 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 DRAM2Q6UX65 266 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 UNQ9370/PRO34162Q6UXP9 181 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 COLCA1Q6ZS62 124 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 FAM57BQ71RH2 274 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 PAQR4Q8N4S7 273 aaPredicted RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 MS4A15Q8N5U1 240 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ZBTB34Q8NCN2 500 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 SLC30A7Q8NEW0 376 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 OR8B12Q8NGG6 310 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 OR13C5Q8NGS8 318 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 OR10AC1Q8NH08 325 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 OR5AK2Q8NH90 309 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF420Q8TAQ5 688 aaPredicted RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 SGK3Q96BR1 496 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ISOC1Q96CN7 298 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF799Q96GE5 643 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 CHCHD6Q9BRQ6 235 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 SOX7Q9BT81 388 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 CENPOQ9BU64 300 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 FAM192AQ9GZU8 254 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 OR10A4Q9H209 315 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 PPIL3Q9H2H8 161 aaKnown RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 RNF167Q9H6Y7 350 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 COQ3Q9NZJ6 369 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 CRNNQ9UBG3 495 aaPredicted RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 RSL24D1Q9UHA3 163 aaKnown RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 NUFIP1Q9UHK0 495 aaKnown RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 RALYQ9UKM9 306 aaKnown RBP6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 STUB1Q9UNE7 303 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 GTF2A1LQ9UNN4 478 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 N6AMT1Q9Y5N5 214 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF407Q9C0G0 2248 aa6.08□□□□□ -1.44
LSM3P3-201ENST00000436601 FREM3P0C091 2139 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 MPDZO75970 2070 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 IGHV1-18A0A0C4DH31 117 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 TRBV5-5A0A0J9YX44 114 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 LOC100506127A0A0U1RQW1 187 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 TRIM64BA6NI03 449 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 H3BMQ9 156 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF701M0R085 212 aaPredicted RBP6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 P2RY10O00398 339 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 GABRPO00591 440 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 PIN1P1O15428 100 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 LMX1BO60663 402 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 ZG16O60844 167 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 TUSC2O75896 110 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 NGFP01138 241 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 IGLV3-1P01715 115 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 APOC1P02654 83 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 LCATP04180 440 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 HLA-DPB1P04440 258 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 ANXA2P07355 339 aaKnown RBP6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 CECR9P0C854 216 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 ZNF35P13682 527 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 GALP22466 123 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 CCNOP22674 350 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 FGF9P31371 208 aaPredicted RBP6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 APLNRP35414 380 aa6.07□□□□□ -1.44
LSM3P3-201ENST00000436601 WNT5AP41221 380 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms