RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 TUBG1P23258 451 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 ALDH3B1P43353 468 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 SLC3A1Q07837 685 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
CNOT9-205ENST00000433439 SPHARQ15513 63 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 RNLSQ5VYX0 342 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 MBNL2Q5VZF2 373 aaKnown RBP13.15□□□□□ -0.3
CNOT9-205ENST00000433439 FBXW12Q6X9E4 464 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 RDH10Q8IZV5 341 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 SVOPQ8N4V2 548 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 ZNF676Q8N7Q3 588 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 HAVCR1Q96D42 359 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 LYZL4Q96KX0 146 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 DYNLRB1Q9NP97 96 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 TUBG2Q9NRH3 451 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 CBLN4Q9NTU7 201 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 A0A1B0GVI7 797 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 B9A039 149 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 CFL1P23528 166 aaKnown RBP13.14□□□□□ -0.31
CNOT9-205ENST00000433439 SNRPD2P62316 118 aaKnown RBP13.14□□□□□ -0.31
CNOT9-205ENST00000433439 FAM3AP98173 230 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 DOC2BQ14184 412 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 TMEM255AQ5JRV8 349 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 FDX2Q6P4F2 183 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 RPL22L1Q6P5R6 122 aaKnown RBP13.14□□□□□ -0.31
CNOT9-205ENST00000433439 ZNF773Q6PK81 442 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 C20orf204Q6ZNR8 217 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 SPARTQ8N0X7 666 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 ZNF485Q8NCK3 441 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 OR56B2PQ8NGI1 322 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 GTF3AQ92664 365 aaKnown RBP13.14□□□□□ -0.31
CNOT9-205ENST00000433439 CCL19Q99731 98 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 PDCD1LG2Q9BQ51 273 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 REPIN1Q9BWE0 567 aaKnown RBP13.14□□□□□ -0.31
CNOT9-205ENST00000433439 COMMD4Q9H0A8 199 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 RGCCQ9H4X1 137 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 ST6GALNAC2Q9UJ37 374 aa13.14□□□□□ -0.31
CNOT9-205ENST00000433439 SIRT4Q9Y6E7 314 aaPredicted RBP13.14□□□□□ -0.31
CNOT9-205ENST00000433439 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
CNOT9-205ENST00000433439 A0A0U1RQV5 110 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 hCG_38984A0A1B0GV85 526 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 LOC107986453A0A1B0GWG9 222 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 PLSCR5A0PG75 271 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 OR4C45A6NMZ5 311 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 CD300LBA8K4G0 201 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 H3BSA7 217 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 M0R233 179 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 SYT7O43581 403 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 MRPS14O60783 128 aaKnown RBP13.13□□□□□ -0.31
CNOT9-205ENST00000433439 IGHV3-13P01766 116 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 DANCRP0C864 163 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 NAT2P11245 290 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 ATP6V1B1P15313 513 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 SELEP16581 610 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 CELP19835 753 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 TGM4P49221 684 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 GSK3AP49840 483 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 TAS2R43P59537 309 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 EMX1Q04741 257 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-205ENST00000433439 CDK5R1Q15078 307 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 EFNB3Q15768 340 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 TBCEQ15813 527 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-205ENST00000433439 MST1LQ2TV78 715 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 TSPAN14Q8NG11 270 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 OR5AK2Q8NH90 309 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 HAVCR2Q8TDQ0 301 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 NR1H4Q96RI1 486 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-205ENST00000433439 VRK1Q99986 396 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-205ENST00000433439 TRAF4Q9BUZ4 470 aaPredicted RBP13.13□□□□□ -0.31
CNOT9-205ENST00000433439 OPA3Q9H6K4 179 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 MSL2Q9HCI7 577 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 ACOT13Q9NPJ3 140 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
CNOT9-205ENST00000433439 PLCE1Q9P212 2302 aa13.13□□□□□ -0.31
CNOT9-205ENST00000433439 IGLV3-9A0A075B6K5 115 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 A6NIN4 97 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 OGG1O15527 345 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 LILRA1O75019 489 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 ZFPL1O95159 310 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 CD8AP01732 235 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 UBCP0CG48 685 aaKnown RBP13.12□□□□□ -0.31
CNOT9-205ENST00000433439 KITLGP21583 273 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 CDKN1AP38936 164 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 CCR9P51686 369 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 NEDD8Q15843 81 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 MOGQ16653 247 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 CCDC58Q4VC31 144 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 TMEM244Q5VVB8 128 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 DOK3Q7L591 496 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 ZCCHC24Q8N2G6 241 aaKnown RBP13.12□□□□□ -0.31
CNOT9-205ENST00000433439 OR10AC1Q8NH08 325 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 CACNG6Q9BXT2 260 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 TPK1Q9H3S4 243 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 ZNF696Q9H7X3 374 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 GPR160Q9UJ42 338 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 ZNF391Q9UJN7 358 aa13.12□□□□□ -0.31
CNOT9-205ENST00000433439 DSCAMO60469 2012 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms